Ciona intestinalis (yellow sea squirt): 100186298
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Entry
100186298 CDS
T01056
Name
(RefSeq) 39S ribosomal protein L37, mitochondrial
KO
K17418
large subunit ribosomal protein L37
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cin03011
]
100186298
Ribosome [BR:
cin03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
100186298
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDCD9
DUF4817
Motif
Other DBs
NCBI-GeneID:
100186298
NCBI-ProteinID:
XP_002127665
Ensembl:
ENSCING00000009173
UniProt:
F6Z589
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Position
5:complement(4359724..4364101)
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AA seq
473 aa
AA seq
DB search
MSHGLCVLRSALKPQFSCVPSIYNVQVQQRRGKAQKKKVYKVVYSKRMRARIPKNWRDVN
YNPANIPSAWKPDNWMKENMVDYEREEELAKYIPGYNKKIPLEMQENYQENPAFLIDDQT
EMSGGLKQSLFITKSILAGPGLPSNVMERMEEHPIDTQEYTQDERVKQTLRHALLFDIDP
RSLDKEAKVKMYKQESYQIYSKPDRYVPLIMKNLIRMCDAKLSHVSDSFGDRMSVEQLPS
NATFKRVCDTFENKLLPGIDTEWNVSINSKPDIQVLTKKPLPMFANQDEVKSTSNTLLPN
LYPILPVINLKKSHLYNPELTTGLYDNFPRPYLHTVVLYNINGVGASEMYAKMNQTLFTA
LFTRAQDIYGPDAEVLSEPLTGQCIASNGQSFQFMCMQLNTMDLSNDNGVKNMVWVDDEN
PDDFLDAVDEVPASSMMYEECSHATWWSPEYITAYNENVFKLFKAIWLNNVAK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacggtctctgtgtgctacgatcggctttaaaaccacaattttcttgcgtgcct
tcgatatacaatgtgcaagtacagcagcgtcgtggcaaagcacaaaagaagaaagtttat
aaagtggtctactcgaagcgaatgagagctcgtatcccaaagaactggagagatgtgaac
tacaatccagcaaacattccttcagcttggaaacctgataattggatgaaggaaaatatg
gtggattatgaaagggaggaagaacttgcaaaatatattcctgggtataataagaaaata
cctcttgaaatgcaagaaaactaccaagaaaatccagcatttttgatcgatgaccaaaca
gagatgtctggaggtcttaagcaatccttgttcattactaagtccatattagctggacct
ggattgccaagtaacgtaatggaacgtatggaggaacatcctattgatacacaagagtac
acacaggatgaaagggttaaacagactctgcgacacgcacttctgtttgatattgaccca
agatcattagacaaggaggccaaagtgaaaatgtacaaacaagaatcttaccaaatatat
tccaaacctgacagatatgttccattaattatgaagaacctcattcgaatgtgtgatgct
aagctttcccatgttagtgattcctttggtgaccgcatgtcagtggaacagctaccatct
aatgctacttttaaaagagtttgcgacacatttgagaacaaactgcttccaggaattgac
actgaatggaatgtttctattaattccaaaccagacattcaagttttgactaagaaacct
ttaccaatgttcgcaaatcaagatgaagtaaaatcaacatcaaatactttgctaccaaac
ctttacccaatactacctgtgattaacttaaagaaatcgcatctctacaaccctgaatta
actacaggtctttatgataactttccacggccatacctacacactgtagtcctgtataat
attaacggtgttggtgcaagtgaaatgtacgcaaagatgaaccaaactcttttcactgct
ttgtttacccgtgcacaagacatttatgggcccgatgcagaagtgctatctgagccactg
acagggcagtgtattgcatctaatggtcagtcgttccagtttatgtgcatgcaacttaac
acaatggatctcagcaatgataatggtgtcaaaaacatggtttgggttgatgatgaaaat
cccgatgattttctggatgcggttgatgaagttcccgcatcttccatgatgtatgaagaa
tgttcccatgctacatggtggtcaccagaatacatcaccgcttataatgaaaatgttttc
aaactttttaaagccatttggttgaataatgttgcgaaataa
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