Ciona intestinalis (yellow sea squirt): 100186298
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Entry
100186298 CDS
T01056
Name
(RefSeq) 39S ribosomal protein L37, mitochondrial
KO
K17418
large subunit ribosomal protein L37
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
100186298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cin03011
]
100186298
Ribosome [BR:
cin03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
100186298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDCD9
DUF4817
Motif
Other DBs
NCBI-GeneID:
100186298
NCBI-ProteinID:
XP_002127665
Ensembl:
ENSCING00000009173
UniProt:
F6Z589
LinkDB
All DBs
Position
5:complement(4359724..4364101)
Genome browser
AA seq
473 aa
AA seq
DB search
MSHGLCVLRSALKPQFSCVPSIYNVQVQQRRGKAQKKKVYKVVYSKRMRARIPKNWRDVN
YNPANIPSAWKPDNWMKENMVDYEREEELAKYIPGYNKKIPLEMQENYQENPAFLIDDQT
EMSGGLKQSLFITKSILAGPGLPSNVMERMEEHPIDTQEYTQDERVKQTLRHALLFDIDP
RSLDKEAKVKMYKQESYQIYSKPDRYVPLIMKNLIRMCDAKLSHVSDSFGDRMSVEQLPS
NATFKRVCDTFENKLLPGIDTEWNVSINSKPDIQVLTKKPLPMFANQDEVKSTSNTLLPN
LYPILPVINLKKSHLYNPELTTGLYDNFPRPYLHTVVLYNINGVGASEMYAKMNQTLFTA
LFTRAQDIYGPDAEVLSEPLTGQCIASNGQSFQFMCMQLNTMDLSNDNGVKNMVWVDDEN
PDDFLDAVDEVPASSMMYEECSHATWWSPEYITAYNENVFKLFKAIWLNNVAK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacggtctctgtgtgctacgatcggctttaaaaccacaattttcttgcgtgcct
tcgatatacaatgtgcaagtacagcagcgtcgtggcaaagcacaaaagaagaaagtttat
aaagtggtctactcgaagcgaatgagagctcgtatcccaaagaactggagagatgtgaac
tacaatccagcaaacattccttcagcttggaaacctgataattggatgaaggaaaatatg
gtggattatgaaagggaggaagaacttgcaaaatatattcctgggtataataagaaaata
cctcttgaaatgcaagaaaactaccaagaaaatccagcatttttgatcgatgaccaaaca
gagatgtctggaggtcttaagcaatccttgttcattactaagtccatattagctggacct
ggattgccaagtaacgtaatggaacgtatggaggaacatcctattgatacacaagagtac
acacaggatgaaagggttaaacagactctgcgacacgcacttctgtttgatattgaccca
agatcattagacaaggaggccaaagtgaaaatgtacaaacaagaatcttaccaaatatat
tccaaacctgacagatatgttccattaattatgaagaacctcattcgaatgtgtgatgct
aagctttcccatgttagtgattcctttggtgaccgcatgtcagtggaacagctaccatct
aatgctacttttaaaagagtttgcgacacatttgagaacaaactgcttccaggaattgac
actgaatggaatgtttctattaattccaaaccagacattcaagttttgactaagaaacct
ttaccaatgttcgcaaatcaagatgaagtaaaatcaacatcaaatactttgctaccaaac
ctttacccaatactacctgtgattaacttaaagaaatcgcatctctacaaccctgaatta
actacaggtctttatgataactttccacggccatacctacacactgtagtcctgtataat
attaacggtgttggtgcaagtgaaatgtacgcaaagatgaaccaaactcttttcactgct
ttgtttacccgtgcacaagacatttatgggcccgatgcagaagtgctatctgagccactg
acagggcagtgtattgcatctaatggtcagtcgttccagtttatgtgcatgcaacttaac
acaatggatctcagcaatgataatggtgtcaaaaacatggtttgggttgatgatgaaaat
cccgatgattttctggatgcggttgatgaagttcccgcatcttccatgatgtatgaagaa
tgttcccatgctacatggtggtcaccagaatacatcaccgcttataatgaaaatgttttc
aaactttttaaagccatttggttgaataatgttgcgaaataa
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