Ciona intestinalis (yellow sea squirt): 100186321
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Entry
100186321 CDS
T01056
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG5-like isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100186321
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100186321
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100186321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
100186321
NCBI-ProteinID:
XP_002127754
Ensembl:
ENSCING00000021500
LinkDB
All DBs
Position
4:1531204..1540400
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AA seq
366 aa
AA seq
DB search
MSVFLFAIGVIMFYFLYVTYDSDSKKQNTRSRTQSFNCSPSANTKDRIYFAVRRYFYSIV
NPINNNYENGKPDPFLFRAFSDRFQTFEDVSGAMVDAGIKKCQLILGIDFTASNEWQGRV
SNRGQSLHNITQKFKANQNPYQHVITILQHTLKDMVDANVPKHLNLKELSEEEKRSKKLH
GIHAFGFGDSVTKDISTFCLRADGMPCGSFDDVLHCYRECASKITLGGPTSYAPIVHKAI
EIVEQTNQYNILVIIADGQFVDEGPTARAIVEASYYPLSIIVVGVGDGPWDTMHQFDDWL
PERNFDNFQFVEYGKIISNTYDKSKNPETMLALHMLMEIPDQYKIIHKLGYMSQPHHNVS
LDSKGL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgttcttgtttgcaatcggagttattatgttctattttttgtacgtaacgtac
gactccgactctaagaagcagaatacacgttcaaggactcaatcttttaactgcagtcca
tccgccaatactaaagacagaatttatttcgctgtacgaagatatttctactcaattgtg
aaccctattaataacaactatgaaaatggaaaaccagatccatttttgtttcgtgcattt
tctgacaggttccaaacttttgaggatgtttctggtgcaatggtcgatgcgggcatcaag
aagtgtcagcttattcttggcattgattttactgccagcaacgagtggcaaggcagagtt
agcaacaggggacagtcgcttcataatatcacacaaaaattcaaagcaaatcagaatcct
taccaacatgtgattaccattcttcagcataccttgaaagacatggttgacgcaaacgtt
ccaaaacatctaaatttaaaggagctatcagaagaggaaaaaagaagcaaaaagcttcat
gggattcatgcgtttgggtttggtgattcggtaacaaaagatatttcaactttttgttta
cgagcggacggtatgccttgcggaagctttgatgatgttttgcattgctatcgtgagtgt
gcttcaaaaattacacttggtggtcccaccagttacgctccgatcgtgcacaaagcaatt
gaaatagtggagcaaacaaatcagtataatatactggttattatagcagatggacaattt
gtggatgaagggcctacagcgagggccattgtagaggcctcatactacccattaagtatc
atagttgttggagtgggtgatggaccatgggataccatgcaccagtttgacgactggtta
cctgagcgaaatttcgacaattttcagttcgttgaatatggaaaaataatctcgaacact
tacgataaatcaaagaatccagaaacaatgcttgctctgcacatgctcatggagattcct
gaccaatataaaataattcataaacttggttatatgtcgcagccccatcataatgttagc
ttagactctaagggactataa
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