| Entry |
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| Name |
(RefSeq) uncharacterized protein LOC100186329
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| KO |
| K25857 | AT-rich interactive domain-containing protein 5 |
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| Organism |
cin Ciona intestinalis (yellow sea squirt)
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| Brite |
KEGG Orthology (KO) [BR:cin00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:cin03000]
100186329
Transcription factors [BR:cin03000]
Eukaryotic type
Helix-turn-helix
ARID
100186329
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
8:1507769..1535785
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| AA seq |
1655 aa
MTNRHHNANPRSAAPRGDAVTWVGGNCGRHGSYVFYKAFRYHITSEPTRLPSLPNTPRGR
TRDRRHQSEASRSDDADSPDDVARDVIGTEERILALGEFFFVQCRPEDPVCVGELQLLWH
DKHSGQDLASTRLYYLPDTTPAGRTSQHGEDEMLAVSEKIVMRTTDLASWLVEPEEWNYG
SPLLLTPKPPNGGVIQPTTPPLHRYSLLHSSVNMQDVLMERKALNTSTNTACCLHSNATA
QEDGSPVQQTCQCNGARRHKAEVLMLSVSAYCRHKALMKRIEGTERDWLERPGAGLMLAA
LGIFTSDNPRARVVFCRDTFDYPQLFEHDLICEELAPVFKGRPRKKPKNKNGSNGSKLGN
KKSSGSAGIRNVANKQENASSEKDGEALTPTRRYSSRRRSKRKSPQTSLYEQEFAPQSRS
NKRSRRTSARTPTPVSELSDVKPRLEASSRSEPASPDSKTSVNGGYASEATVAQTIDAAA
QAAVTNSWKKKTRPKRRPGRRSSTSALSIAIKNSLLENNPVSKENDSTENKTSQVPRPPS
TSSCVSSSSDPSSRSSSPSIELRTRDLNTQAPTQRSDSPASVASSIASHDGLSSPSSGSP
LDFTAIMSDDQCSVRANVTPLTTEDSESLRGLRDGKILESQSAFLELLYQFMRKRNTPIG
RIPSLGFKKLDLWTFFKLSQEYGGYDMVTAKRLWKHVYDRMGGNPSCTSAATCTRKHFEK
LLLPLEMHLRKTLRPKDNDLTKNKLDGEVEDVNSNSTTPLHISPQLRTFNGDAYFHNETS
LHKPGKPATHSTATDQQSKRTEILVGKQQHYEKGATPLSSTNSTSCIAASVAPFVNFEAL
AHSVIRDELLANRGPHSSSQRHQNEHSLSPRPHDLTKTPDSHPASTRAETTRIITPSPSE
RQGVVTTVPSTQHSHFGPPLFSIRTRTHCPRSSGAPPPFVPTRSKPVQLLAEAGARLGGD
NGEGSRSKPPMFDDKHDSERLAERHRNQQKRQFGEVSNPASSSPSSPKRPCPATSLTTPS
PSNRRYDIRNLVSIPTEDNSKTRNPDIGSAKTFPNPDGPRQQVSETEATRLKYDPLIRRV
FPDHRPTKVAPIGEHDAERTQSRQVTPKSHVTDRGVRNPDETNRPREEFVDRHWRPEVGI
DRKRESEDAHRRSSATSSSGYYYPPKNNNTSHKEAYYRPVGMIASYREAKQRIQQQQQQK
HTPSDPAPKPGHHTQQASSHEKMSGPHMVAEERKILRPSSPHRPSGNGTSHYQTPTPKPL
MQKRDSQSYSHHHTPSHNARPPTKREPDSERKPFSASFSVDRLTAKSHDAPNPHKPQPPK
QEPTQQRYPFVPGRVATPKQSPYADRCAPDRRSFPPSATGDPFRSQHSLSHPQGRNGATP
TRLSKPEYIPDRSPRDGKSDIFATPPGRAKDPSPPVKHGSHLSPSARALLANLPPPVASA
IYPYIPKDCPPHVLARILQETEKVIGITPGAPPVPPPLDIMARHQAHFTQQQKQLEHQTA
LQDAVLRQHLAGDPFRMISPQEQQAAAMDYLARAASAVNGGTAPNMQPGPDPALMASKLQ
MYQLYTQQLASLHQNVARQLQETAGPSVPQAAKLGHVTSSDMLQQLARISSGQIGNGTTA
FPDLRNPSYLAATPQIPPQMTPEVAARLAYSIGRR |
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| NT seq |
4968 nt +upstreamnt +downstreamnt
atgacgaatcgacatcacaatgcgaacccgaggagcgcggcgccgaggggagatgctgtc
acgtgggtgggcggcaattgcggtcggcatggatcctacgtcttctataaagcgttccgc
taccatatcacctctgaaccgacacgattaccctccttgccaaatacaccacgcggtcga
acacgagaccggaggcatcagtccgaggcctctcgctctgatgacgcagactcgcctgat
gacgtagctcgtgacgtcataggcaccgaagagcgcatattggcgcttggggaattcttc
ttcgttcaatgccgccccgaagaccctgtgtgcgttggtgagctacagctgctttggcac
gacaaacactctggacaagaccttgcctctacaaggttatattacttgccggacactaca
ccggctggaaggacatctcaacatggtgaagacgaaatgttggcggtttcggaaaagatc
gttatgcgaaccaccgaccttgcctcgtggttggtcgagcctgaagaatggaactatggc
agcccccttctccttaccccgaaacctccaaacggtggtgtaatacaaccaactactccc
cccctccaccgatattccctcctacactccagtgtaaatatgcaggacgtactgatggaa
cgaaaagctctcaacacatcaacaaatacagcctgctgcctacattccaatgctacagcc
caagaagatggaagtcctgtacagcaaacttgccaatgcaacggtgccaggagacacaag
gcagaagttctaatgctgagcgtcagtgcttactgtagacacaaggcgctaatgaagcgt
atcgaaggaacggagcgtgattggctggagcgtccgggggcgggtttgatgcttgctgca
cttggaatattcacgagtgacaacccgagagcaagggtcgtgttttgtcgggatactttc
gactatccccagctttttgagcacgatttgatctgcgaagagctcgcgccagtgtttaag
ggtcgcccgcgtaagaagcctaaaaataagaacggctcaaacggatctaaattaggcaac
aaaaagtcatcgggaagtgctggaattagaaacgtagctaataagcaagaaaacgcatca
tcagaaaaggacggcgaagctctcaccccgactcgaagatacagcagccgccgccgcagc
aagcgcaaatccccgcagacatcactttacgagcaggagttcgcgccgcagtcccgatcg
aacaaaagaagccggcgtacttctgcgcgcaccccaacaccggtcagcgaactctctgac
gttaaaccaagacttgaggcttcttcgaggtcggaacccgcctcccctgactccaaaacc
agcgtcaacggaggatacgcttcagaagcgaccgtagcgcaaactattgacgcggctgcg
caagccgcggttaccaactcctggaaaaagaagactcgaccaaaacgccgcccaggacgc
cgatcctccacctcagctttaagcatagcaatcaaaaacagtctactagaaaataaccca
gtttcaaaagaaaacgactccaccgaaaacaaaacctctcaagttccccgccctccctct
acatcaagctgcgtgtcttcatcgtccgatccatcgtctcgaagttcgagtccctcaatt
gagcttcgaacccgggatcttaatacccaagcccccacacagcgttcagattctccagca
tctgttgcttcttctatcgccagccacgacggtctttcttcgccttcgtctggttctccg
cttgattttactgcaataatgtctgacgatcaatgctctgttcgagccaacgttacgcct
ttgactacggaagattcagagagccttcgcgggcttcgcgacggtaaaatcctggagtcg
caatctgctttcctcgagcttctgtaccagttcatgaggaaaagaaacacacctattgga
agaataccttctctggggttcaaaaaacttgacctgtggacctttttcaagctctcccaa
gaatacggaggttatgacatggtaacagccaaacgtctatggaaacacgtctatgaccgt
atgggcggaaatccctcttgtacaagcgctgctacgtgtacaagaaaacatttcgaaaaa
ttactgttaccattggaaatgcatctccgaaaaacattacgtccgaaagacaacgatttg
acgaaaaataaactggacggggaagtagaagacgtcaattcaaattcgaccacacccctc
catatttcacctcagttaagaacttttaacggagacgcatattttcacaacgaaacttca
cttcacaaacccggcaaaccagctacacattctacagcaacggaccaacagtcgaagaga
accgagatccttgtcggcaaacaacaacattacgaaaaaggtgctacgcccctttcaagc
accaatagcacaagctgtatcgcagccagcgttgccccgttcgtcaattttgaggcgctt
gctcacagtgttatccgagacgaacttctcgccaaccgggggccgcacagtagcagccag
cgtcatcaaaacgaacacagcctgtccccaagaccccacgacttaactaagacccctgat
tcccacccggcatccactcgagccgaaacaactcgtattattactccttctccgtcggaa
agacaaggtgtcgtcacgactgtaccatcaacacaacattcccactttggaccgcctctt
tttagcattagaactcgaacacattgtcctcggtcgagtggtgcccctcctccgttcgta
cctaccagatcaaaaccggttcaattgcttgccgaagctggcgcgcgtcttggcggcgat
aacggcgaaggcagtcgttcaaaaccgccaatgttcgatgacaagcacgattccgaaagg
ctcgcagaacgccaccgaaatcaacagaaacgtcaatttggagaagtatcaaacccagca
tcgagttccccgtcaagtccaaaacggccttgtcctgctacatcccttacaacaccttcg
ccaagcaatcgaagatacgacattcgaaacttggtctcaattccgacagaagataactcc
aaaacaagaaatcctgatattggctcggcaaagacttttccgaaccccgacggtccgagg
cagcaagtttcggagaccgaggcgactcggctaaagtacgacccactaataagacgagta
tttccggatcaccggcccacaaaggtagcgccgatcggcgaacacgacgctgaacgtacg
caaagtcgccaggtgacgcccaagagccatgtaacggatcggggagtgagaaacccggac
gaaacgaatcgaccccgggaggaatttgttgaccgacattggcgtccggaagttggtata
gatcggaagagagagtcggaagatgctcatcgaagatcatctgctacatcttcctccgga
tactactatccaccgaagaacaataacacttcacataaagaagcctactaccgccctgtc
ggcatgatagctagctatagagaggcaaaacaacgcatccagcaacaacagcagcaaaaa
cacactccttccgaccccgcacccaaaccaggacaccacacacagcaagcaagcagccac
gaaaaaatgtcaggtccacacatggtagctgaagagcgaaagatccttcgcccaagcagt
ccccaccgaccaagtggcaatggaacctcgcattaccaaaccccaaccccaaaaccccta
atgcaaaagcgggattctcagagttactcacaccatcataccccctcacacaacgcacga
ccaccaactaaaagagaaccggactccgaacgaaaaccgttttccgcctctttttccgtg
gatcggctcacagcgaaaagccacgatgctcccaatccccacaaaccgcaacctccaaaa
caggaaccaactcagcagcgatatccattcgtacctggtagagttgcaacaccaaagcaa
tctccatacgctgaccgttgtgcccctgaccgcagatctttcccgccatctgcaacagga
gatccattcagatctcaacactctctctcccacccacaaggccggaacggtgctaccccg
acaagactatctaaaccagagtatatccctgaccgttcgccccgcgacggcaagagcgat
atttttgccacgccgcctggtagagccaaggacccttccccgcctgttaaacatggttcc
catctctccccatccgcgcgggcgttattggcgaatcttccgccgccagttgcttcggca
atttacccgtacatcccgaaggactgtcctcctcacgtgctagcaaggattcttcaagag
acggagaaagtaatcggcatcacgccaggggcacctcctgttccaccaccacttgatata
atggcgcgacatcaggctcattttacccaacagcagaaacaactcgaacaccaaaccgcg
cttcaagatgccgttcttcgacagcatctagccggggatcctttccgaatgattagtcct
caagaacaacaagcagcggcgatggattatcttgctcgcgccgcatccgcggtaaacgga
ggtacggcacccaatatgcaacctggtcccgaccctgctcttatggcgtcaaaattacag
atgtaccaactatacacccaacaactggcgagtctgcatcaaaatgtcgctcgtcagctt
caggaaacagcgggcccaagtgtgcctcaagctgcaaagttggggcacgtaaccagctca
gatatgctgcagcaactagcgcgaatcagcagcggacaaatcgggaatggcacaaccgca
tttccagacctccgcaacccttcttacctggccgccaccccgcaaattccgccccagatg
acgcctgaagttgccgcacgattggcgtactcaatcggcaggcgttaa |
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