Ciona intestinalis (yellow sea squirt): 100186332
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Entry
100186332 CDS
T01056
Name
(RefSeq) claudin-16-like isoform X1
KO
K06087
claudin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03272
Virion - Hepatitis viruses
cin04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100186332
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100186332
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100186332
04147 Exosome [BR:
cin04147
]
100186332
04515 Cell adhesion molecules [BR:
cin04515
]
100186332
Cilium and associated proteins [BR:
cin03037
]
Other cilia and associated proteins
Stereociliary proteins
100186332
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
100186332
Exosomal proteins of colorectal cancer cells
100186332
Cell adhesion molecules [BR:
cin04515
]
Immunoglobulin superfamily
L1 family
100186332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
100186332
NCBI-ProteinID:
XP_002119352
Ensembl:
ENSCING00000004762
UniProt:
F6PMJ8
LinkDB
All DBs
Position
5:complement(2525107..2527741)
Genome browser
AA seq
274 aa
AA seq
DB search
MADYATDSASSVIAPLCKFAGFIFGLTAASCVVFVTVTPCWYVIYAEASISPYENCYGLW
KFCSSTGLCGKWLSGSLLGSHGAQRTVCRGLMITACLLSGFALILNVMGMRCILLFRLLP
RTKEKLTRRAAVVWIVAGTFVLISSTWYGLEVMYSVWDEGKASELSDGIFVGWGATAFAY
AAAGLLWIGATVSRSERKEAEKRRDSILSTVAAAYAASRSGSGASTTCCCYLAPRLLGCG
HECGHHSNTGDDKIRTLEPITECQVTSHARTTYM
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcagattacgctacagacagcgcttcgtctgtaatagcgccgttatgcaagtttgct
ggttttatttttggactgacagccgctagttgtgtagttttcgtgaccgtaactccttgt
tggtacgtcatctatgccgaagcatcgatctcgccatacgagaattgttatggtctttgg
aaattttgcagctctaccggtttgtgtggaaaatggctttccggttcccttctcggctcg
catggagcgcagcggacagtatgcagaggtctcatgataactgcttgtctactaagtggg
tttgctttgattcttaacgttatgggaatgcgatgcatcctgctttttcgtcttttacca
cggacaaaagaaaagttaactcgacgtgcggctgttgtatggatagtagcaggtaccttc
gtattaatatcaagcacctggtatggtctggaagtaatgtattcagtatgggatgaaggt
aaagcttccgaactttcagacggtatatttgtgggttggggagcaactgcgtttgcttat
gcagctgccgggctattgtggataggtgcaactgtatcgagaagtgaaaggaaagaagca
gaaaaacgacgagattcgattttatcaacagtagccgcggcgtacgctgctagtcgcagt
ggttcaggggcaagcacgacttgttgctgctacttggcgcctcggctgctcggctgcggc
cacgagtgcgggcaccatagcaacacaggggacgacaagatacgaactctggaacccatc
actgaatgtcaggtgacatcgcacgcaaggacaacatacatgtaa
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