Ciona intestinalis (yellow sea squirt): 100186371 Help Entry 100186371         CDS       T01056                                  Name (RefSeq) partitioning defective 3 homolog   KO K04237   partitioning defective protein 3 Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin04144   Endocytosis cin04517   IgSF CAM signaling Brite KEGG Orthology (KO) [BR:cin00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     100186371  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100186371  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:cin01009]     100186371 Protein phosphatases and associated proteins [BR:cin01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      100186371 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PDZ Par3_HAL_N_term PDZ_2 PDZ_6 Motif Other DBs NCBI-GeneID:  100186371 NCBI-ProteinID:  XP_026694076 LinkDB All DBs Position Unknown AA seq 1491 aa AA seqDB search MQVSLENITRVAATLFNVIKDSEYWIRVLQLSAVDGGILDWDDFVYDVIEDKDKLIAVYE EEEPQPVDWDLGSITSSEGRSSRSAMINTKYTPTNGRIIYQPHSKDTSLEVDVGLDALKS NSQIVVRRDNDVSDASMNHDSILSSIEQFIIKCISPPSDSQIVVRRDNDVSDASMNHDSI LSSIEQSDDRGQNGSYLQQIMKNTKHPEPKQPDHRHDDERSYFVRDVTRQSMASGLSESV ESDKQYYNPLHTTTYYNYPSSPNNKPNGYEEQTDKSKDSVYAESLPWFYKDSQEVCLSND GRELGIQVSEYRDRSNNKFAGLLVSSIKSGSRVEEEKLLSLGDVIVEINQHVLMYFNLDD AKAILNESCHYAELQLRILPVEELERHVEFESRPNNVPSLSLTTASPPISSDAQPKNLSV SQSSTSASSMSTHESTSPHTKLPLIAQQSYDNVSCYTRKIGSRIDIQLMKETSGLGFSIT TRDTSVGDPGPIYIRNILPTGAAVQDGRLQAGDRLLEVNGEDMNGKTQEDAVAILRGIVI GSLVNLVVSRQNETLPRKLKDDPVTDKVIREENVKEFFMFEIPLNDTGSAGLGISLKGNQ SKKSGKDLGIFVKAIFHGGAAWQDGRLKVNDQLVKVNGHSMTGATNREAIDILRTSMSNE GNIRGLIQMVVARRHPTSSRVSSEASSDLSDSILDQLSTRSGSQDTVKPMHRKQASLPAL FVETSFGSDDAPPVSSTLERKDKRGRPSSRGAVARRISHHHIRSKSVTAESDHVDVEVVK KVREKILNSSSSSFLSNLIQQSPASPTSPDPSRSSTPNPYATWTIPRTHRIAKRSLSLRS SRNNGGVNCGEHSRRVFESITANELTIDDTRSRMMDEDEPLDLSQTRSTSPINPDVVMVD DDWPNVSDPFNRESVTRQSMSEKRKDPIPRLPFNVEGKSNKDVEGKSNKDKDSTTPYSSK QTNNNNSRNFGSNVPQPMTLKKSVSTESLLTANTLHSNCMQGRQEKKADQVDVGPTLGIA KSSSLESLQSAVEKCYVEDKLDAGYPRALPKVVRGRLMNDSFRAALDRSYDMSSGTPHIK PMDISLHKNDDNVQEDADCDQTNEQTRKKRSTNKGTKFFGLFKLNKSKRSQGSSPRGNLA ESEVYKRGLEANRVREFEKMNVEKEIIQAKVHELRNRQLNSQTESKPKSDYDRLRPPSVP VTSMQRIRDNDVILNYNSTSSGRHSVDPSSMKNQSIMTSQREQSPQHPTSSRRKIKDSKF KENSSLHSSLPSLLNIESLNENVHETPVFENYIGNGSIHPYRQPRRERWSNTSHLPHETS PVRQFTSRGTSSMTKFDNREFYNRQKPSSTRSRADPASAEKMRGGRSSLDQRTLYYDDRE RSQPDEFTHRREKSPEPPSQSFYVSNNRTPQRRGTIDVVPTSNIHRHTTSPHQQNTRFAN NDHYDITEDNSRTSESSERNRATFYRLMRTQSPNGIDDRVEKIEISVPYNL NT seq 4476 nt NT seq  +upstreamnt  +downstreamnt atgcaggtctcccttgagaatattacaagggttgcagcaaccctttttaacgttataaaa gattctgaatattggatacgtgtgttacaacttagcgctgtagatggtggtattttagat tgggacgatttcgtttatgatgtcatagaagacaaagataaattaattgctgtgtatgaa gaagaagaacctcaacctgttgattgggatcttgggagtattacaagttcggaaggtaga tccagtagaagtgccatgatcaacactaaatatacaccaaccaatgggagaataatttac caacctcatagtaaagacacttcattggaagtcgatgttggattagatgctctcaaatca aattcacagatagtggttcgaagggacaatgatgtcagcgacgcatccatgaatcatgat tctatacttagctctatagaacagtttataattaaatgtatttctcccccttcagattca cagatagtggttcgaagggacaatgatgtcagcgacgcatccatgaatcatgattctata cttagctctatagaacagagtgacgaccgtggtcagaatggaagttatcttcaacaaatc atgaaaaacactaaacatcccgaacccaaacaacctgaccatcgacatgacgacgaacgt tcgtattttgttcgcgatgtcacgcgacaatcgatggcaagcgggttgtctgagtcagtt gaaagcgacaagcaatattacaaccccctccacacgacgacttattataactacccctct tccccgaacaataaacctaacggttacgaggagcaaacagataaaagtaaagattcggtt tatgctgaaagcttgccatggttctataaagattcacaagaagtatgtttgtccaatgat ggcagggagcttggtatacaggtatctgagtacagagatcgaagcaataataaattcgcc ggtcttctcgtttcctccattaaatcaggatcgagagtagaagaagagaaattgttatcc cttggtgatgtcatagtggagatcaatcaacatgttctaatgtatttcaacctcgatgat gcgaaagcgattttaaacgagagttgtcattatgcggaactgcagttaagaatattgcca gtggaggagctagagagacatgttgaatttgaatcacgaccaaacaacgttccatcgtta tcactgaccaccgcaagcccgcctattagcagtgatgcacaaccaaaaaacctcagtgtt tcccaatcatcaacttcagcttcgtcaatgtcaactcatgaatccacctccccccacacc aagctaccacttattgcgcaacaatcttacgataatgtaagttgttatacaaggaagatc ggaagcagaatcgacattcaactcatgaaagaaacctccggattaggtttcagcatcaca acacgagatacatcagtgggtgatcctggtccgatatatattcgtaacatattaccaacc ggtgctgctgtgcaagatggaaggctacaagctggtgatagattgcttgaagtcaatggt gaagacatgaatgggaaaacacaagaagatgctgttgcaatattgagaggaattgtcatc ggaagtcttgtaaacctcgttgttagtcgacagaatgaaactttaccaagaaaactgaaa gacgatccagtaacagataaagttatcagggaagaaaatgtgaaagaatttttcatgttt gagattccactcaatgatacaggatcagctgggcttggaataagtttgaaaggaaatcaa agcaagaaatctgggaaagatctgggaatttttgtgaaagctattttccatggtggtgct gcatggcaggatggtagattaaaagtaaacgatcaacttgttaaagtgaatggacattca atgacgggagccacgaacagagaagccattgatatattacgaacatcaatgtctaatgaa gggaatattagagggttgatacagatggtggttgcgcgaagacatccaacatcatcccgt gtttcatcagaagccagcagtgatttatccgactctatccttgaccaattatcaacaaga tcaggttcgcaagatacggttaagccgatgcatagaaagcaagcctcactccctgctttg ttcgtcgaaacatcttttggttcggatgatgctcctcctgtgtcctccactcttgagagg aaagataaaagaggaagaccctcatctcgaggcgcggttgctcgtaggatctcgcatcat cacatccgatctaaatctgtgactgctgagagcgatcacgtggatgtggaagttgttaaa aaagttcgggaaaagattttgaactcctcgtcttcgagcttcttgagtaacttgatccag cagtcccccgcttccccaacctccccggatccctccaggagctcgacacctaacccctat gcgacatggaccataccaaggactcaccgcattgcgaagcgatctctttccctccgcagc tcacgtaataatggtggggttaattgtggtgagcatagcaggagggtgtttgaaagcatc acagcgaacgagctcacaatagatgacacgagatcgcggatgatggatgaagatgaacct cttgatctctcacaaacaagatcaacatctcccatcaatccggacgtagtaatggttgat gatgattggccaaatgtttccgatccattcaaccgcgaatctgtcactcgtcaatcaatg tcggagaaacgaaaagatccgataccgaggttgccgtttaatgttgaggggaagtccaac aaggatgttgaggggaagtccaacaaagataaagattctacaaccccttattcatcaaaa caaaccaacaacaataattctcgcaactttgggagcaacgttccccaaccaatgacgtta aaaaaatcagtatcaaccgaatcactgttgactgcaaatactttgcatagtaattgtatg cagggtaggcaagaaaagaaagcagaccaagttgacgttggcccaacattgggaatcgcg aagtcaagttcactcgaaagtttgcaaagcgctgtggagaaatgttatgtggaggataaa ctggatgctggctatcctagagcattgcccaaggttgtaagaggccgattaatgaatgat agttttcgagctgccttggatagatcttatgatatgtcatcaggaactcctcatattaaa ccaatggatatttctctgcacaagaatgatgacaatgtgcaagaagacgcagattgtgat caaacaaacgaacaaacaagaaagaaacgatcaacaaataaaggaacaaagttttttggt ttgtttaaattaaacaaatcgaagcgcagccaaggttcgagtcctcgtggaaacctcgct gaaagtgaagtttataaacgtggtttggaagcaaatcgtgtgagagagtttgaaaagatg aacgttgagaaagaaataatccaagcaaaagtccacgagttacgcaacagacaactcaac tcacaaactgaatcaaaacccaaaagcgattacgatcgactaaggccacctagtgttcct gttacttcaatgcaaagaatacgagacaatgatgtcatattaaactacaacagcacttct agtggtagacattccgttgacccctcctccatgaaaaatcaatccattatgacatcacaa agggaacaatccccccaacacccgacgtcatcgagacggaaaataaaagattcaaaattt aaggaaaactcgtcactgcatagctccttgccaagtttgttgaacattgagtcgttgaat gaaaatgtccacgaaacacctgtatttgaaaattacataggaaatggttcaattcatcct tacagacagccacgaagagaaagatggagcaacacgtcccatcttccccacgaaacgagt cccgtccgtcaattcacatctcgtggaacatcatcgatgacgaagttcgacaatcgagag ttttataatcgtcagaaaccttcatctactagatcccgagctgatcccgcatccgctgaa aagatgagaggcggaagatcttcgttggatcagaggactctttactacgatgatagagaa aggagccaaccggatgaattcactcacagacgagagaaaagtccggaacctccaagtcag agcttttacgtctccaacaatcgaactcctcaaagaagaggaacaattgatgttgttcca acttccaacattcacagacacaccacgtcacctcatcaacaaaacacaaggtttgcaaac aatgaccattatgacatcactgaggataactctagaacctcggaatcatcagagcgtaac cgcgcaacattttatcgactaatgcgaacgcaaagtcccaacggtattgatgatcgggtc gaaaaaattgaaatatctgttccgtataatctgtaa

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