Ciona intestinalis (yellow sea squirt): 100186409
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Entry
100186409 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100186409
KO
K05760
paxillin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04517
IgSF CAM signaling
cin04518
Integrin signaling
cin05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100186409
04518 Integrin signaling
100186409
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100186409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100186409
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
LIM domain-containing proteins
Paxillin family proteins
100186409
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Paralog
GFIT
Motif
Pfam:
LIM
Guanylate_cyc
DUF7685
DUF7479
Motif
Other DBs
NCBI-GeneID:
100186409
NCBI-ProteinID:
XP_009862202
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All DBs
Position
1:3157322..3166769
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AA seq
405 aa
AA seq
DB search
MTKQNNSPNGIVNGKIMNNKPMTGQSPRSHLPPETRIVSSPLISKGRGPSGVVTIISLRV
QGMEELWHKCTEEAIASMLSEYRQVVTRCCKDFHGFEVSSHEDQFLIVFQNPWDAINCCL
TIQSALVQISWSNEVTTCQYFFRLEDTRGIAGKTLLFHGPRVQVGVSRGKVRSEYEYATG
STRYSGSELDIAVGIARIAKGGQVLVNTTAWTEVQRPQLTPCVHNDTGRHKVEASDKRLR
LIELLPAALAERSKHFGTSCSNCGDRIRPDQGYIKALGRHWHLKHFRCYHCNVPLMDSYI
VKDGMPYCLDDFFTLHARTCHGCDTIITGSYIEAMSNYWHPDCFVCQKCRRPPEGNENIY
ELNALPFCLKCYHEVASSVNNGRSKSQNKVLRSTEITKHHTVVKS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcaaaacaattctcccaacggaatcgtcaacgggaaaataatgaataataag
cctatgacaggacagtcaccaaggtcgcatctaccaccagaaacaaggattgtatcttct
ccgcttatatccaaggggagaggtccaagtggagttgtgacgatcatttcattgcgtgtg
caaggcatggaagaactctggcacaaatgcactgaggaagcaatcgcaagcatgttgtca
gaatacagacaagtggtaacaaggtgttgtaaagattttcacggatttgaggtttcatct
catgaagaccagttcttgatcgtgtttcaaaacccgtgggatgccatcaactgctgcctg
accattcaaagcgcgctggttcaaatctcgtggtcgaatgaagtaacaacatgtcagtac
tttttccgacttgaagacactcgtggtatagctggtaaaactttgttattccatgggcct
cgtgtacaagttggcgtttcaaggggaaaagtgcgatccgaatacgaatatgcaacaggc
agcacgaggtacagcggcagtgaactagacatcgctgtcggtatcgcccgcattgcaaaa
ggtggccaggtacttgtaaatacaacagcgtggactgaggtacaacgcccccagctaacc
ccttgtgtgcacaatgatacgggaagacataaagtcgaagccagtgataaaaggcttcgt
ttaattgagttgttacctgctgcactcgctgaaagatcaaagcacttcggtacgtcatgt
agtaattgcggagatcgtatacgacccgaccaaggatatattaaagctttagggagacat
tggcatttgaagcattttcgatgctaccactgcaacgtaccgcttatggactcatatatt
gtgaaagacggaatgccgtattgtctggacgacttcttcacattacatgcgcgtacatgc
cacgggtgtgatactattataactggctcgtatattgaagctatgtcaaactattggcat
cctgattgtttcgtgtgtcagaaatgtcgacgccccccggagggaaacgaaaatatctac
gagttgaacgctctgccattttgtttaaagtgttaccacgaagtggcatcatcagtgaac
aacggtcgaagcaagtcgcaaaacaaagtcttacgaagcaccgagatcacgaaacaccac
acagtggtcaaatcctaa
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