Ciona intestinalis (yellow sea squirt): 100186454
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Entry
100186454 CDS
T01056
Name
(RefSeq) WD repeat-containing protein 36-like
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100186454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100186454
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100186454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_WDR35_2nd
Beta-prop_IFT140_2nd
Beta-prop_VPS8
Beta-prop_WDR11_2nd
Cytochrom_D1
Cor1
Motif
Other DBs
NCBI-GeneID:
100186454
NCBI-ProteinID:
XP_002119330
Ensembl:
ENSCING00000005687
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MFQVFFKCNMGNQSKIFEGFKALGLHSSHIRHVIRLHRRLNDFYVIVPVGKVFHTYNCSK
LGICYVSNSHPQDIECIAVDSFLVYTGCQNVVRVFEYNTQIKYTLEGHTSDVHLIHPLGK
HLISVDKSNCVKIWHVQTGEQYLNIEFSSSVFEITTLVHPSTYVNKVLFGSKQGLLQLWN
VSRNKMLYEFGPWKDSRITCLEQSSAVDIIGVGTETGDILLLNLKTGDVLMKFMQDYGPV
TCISFLTDGSSTMATGTVSGHICLWDLEEKILKGLMSNAHAASVAGLTFIPSQPLMVTNA
ADNTIKIWAFDTEDGMGRLLRERSGHYGPPVKVRFHDETSVISSGYDSTIRLFSCVHSSK
DKNFGQASMNRAQAKKKGIRIDDKKLPPVVEFCVERARESQWDGLVAVHYRHPLATSWNV
KCSRMGSHKFLHDRFKTAGKGEKKLVSFKNHHVTSVALTACGNFTLIGYSTGHLDMYNIQ
SGIHRGTYVDKSLGKTAGDKAHSASVVGVAVDALNQITVTAGNEKCFKFWRFKENTILDK
LELDCVPSQINLHRDSGMVAVACNDFSVKVVDIDTRKVVRNFTHHTGVINDLCWSSDARW
LITASSDCTVRTWDLPSATLIDCFAVDNAVTSLNLSPNCDMLATSHVDDLGVYIWSNRYL
YSHISLQPLPLDYEPDDAVDLPLTIPLPVSEVAETPDEEKQANEDIKCEQLESNLITLAC
LPQSRWANLLQLDVIKQRNKPKEAPKVPKSAPFFLPTASALVPSFITDPDVKDTDSSKIT
SLKSIENFSEFAAILNNCSSIENYSSALEYLKKQGPSAIDTALRSLDPFCGGSNALLEIF
LDFVEEIFISRRDFEAIQAYFGLFLKIHADTLASIPGVESKLERILKRQEEDRKEISYLL
NQAMCVTNFIKSAGI
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggtgtttttcaaatgtaatatgggaaatcaatccaaaatattcgagggtttt
aaagccttaggattacattcttctcatattcgacatgttatacgactacacagaagattg
aatgacttctatgtgattgtacctgttgggaaagttttccacacctacaactgctcaaaa
ttgggaatatgttacgttagcaacagtcacccacaagatattgaatgtattgctgttgat
tcattccttgtttacactggatgtcagaatgtagtgagagtatttgaatacaatactcag
atcaaatatacacttgaaggccacacaagtgatgtacatttgatacatcctttaggcaag
cacctcatttcagttgataagtcaaattgtgtcaagatatggcatgtacaaactggtgaa
caatatcttaacatagaattttcatcatccgtgtttgaaataactaccttggttcatcca
agtacttatgtgaacaaagttctgtttggtagtaagcaaggattgttgcagttgtggaat
gtttcaaggaataaaatgctgtatgagtttggaccttggaaagactctcgtatcacatgc
cttgagcaaagttctgcagtggatattataggggtgggaacagaaacaggtgatatcttg
ttacttaacttaaaaaccggagatgttttaatgaagtttatgcaagactatggaccagtt
acttgcataagctttttgactgatggttcaagcactatggctactgggacagtatcgggt
catatttgcttgtgggatttggaggaaaagatcctgaaagggttaatgtctaatgctcat
gctgctagtgttgctggtttgacgttcattccatcacagcctttaatggtgacaaatgct
gcggataatactattaaaatctgggcctttgatacagaggatggtatggggcgtttgttg
agggagagatcgggccattatggtcccccagtcaaagttcgttttcacgatgagacatct
gttatttcatcaggttatgactcaacaattcgattattttcatgtgtacatagcagtaaa
gataaaaacttcggccaagcttcaatgaatcgagcacaagcaaagaagaagggtattcga
attgatgacaagaaactgcctcctgtagttgagttttgtgttgaacgggcaagagaaagt
caatgggatggacttgtagctgttcactaccggcacccacttgccacaagttggaacgtc
aagtgcagtcgcatggggtctcataagttccttcatgacaggtttaaaactgctggaaaa
ggtgaaaagaagttggtgtcgtttaaaaatcaccatgttacaagcgtagcgcttacagct
tgtgggaattttactctgattggatatagcaccggtcaccttgatatgtacaacatacaa
tctggtattcatcgtggcacttatgttgataaaagtttagggaaaactgctggtgacaaa
gcacattctgcatctgtggttggggtagctgtggatgctctgaaccaaataactgtgact
gctggaaacgaaaaatgttttaagttttggagatttaaggagaacacgattctggataaa
ttggagttggattgtgttccttcgcaaattaacttgcatagagacagtggaatggtagcg
gttgcatgtaatgatttttccgtcaaagtggttgatattgatacaagaaaagttgtacga
aactttactcaccatactggtgtgattaatgatctatgttggagcagtgatgcaagatgg
ctgatcactgcatccagtgattgcacagtaagaacgtgggatttaccatctgctactctt
atagactgctttgccgttgataatgcagtcaccagtttaaatttgtctcccaactgtgac
atgctggcaacatcccatgtagatgatcttggtgtttacatttggtcaaatagatatttg
tattctcatatttcacttcagccattgccattggactatgagccagatgatgcggtggat
ctccccctcacaattcctctccctgtttcagaggttgcggaaactcctgatgaagaaaag
caagcaaatgaagacataaagtgtgaacaacttgaaagtaatctaatcactcttgcttgt
ctccctcagtcacgatgggcaaatcttcttcaacttgatgttataaagcaaagaaacaag
ccgaaagaagccccaaaagtccctaaatctgctccattctttctcccaacagcttctgca
ctcgtcccaagctttattactgatccggatgtaaaagacaccgattcttcgaagatcaca
tcactaaaatctattgagaacttttcagaatttgcagccattttaaacaattgcagttca
attgaaaattacagctcagctttggaatacttaaaaaaacaaggtccatccgccatagac
actgcgttacgctcattagaccccttttgtggtggttcaaatgctttacttgagatcttt
ttagatttcgttgaagaaatttttatttctcgacgcgattttgaggcaatccaagcctat
ttcggactgtttttaaaaattcatgccgacacacttgcctcaatacctggggtagagtct
aaactagaacgaatccttaagaggcaagaagaagaccgaaaagaaatttcatacttatta
aaccaagcgatgtgtgtaacaaattttataaaatctgctggaatttaa
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integrated database retrieval system
