Ciona intestinalis (yellow sea squirt): 100186491
Help
Entry
100186491 CDS
T01056
Name
(RefSeq) ceramide synthase 1-like
KO
K04710
sphingoid base N-stearoyltransferase [EC:
2.3.1.299
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00600
Sphingolipid metabolism
cin01100
Metabolic pathways
Module
cin_M00094
Ceramide biosynthesis
cin_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100186491
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.299 sphingoid base N-stearoyltransferase
100186491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAM_LAG1_CLN8
Motif
Other DBs
NCBI-GeneID:
100186491
NCBI-ProteinID:
XP_002127355
Ensembl:
ENSCING00000001480
UniProt:
F6TI69
LinkDB
All DBs
Position
4:2710686..2715515
Genome browser
AA seq
338 aa
AA seq
DB search
MAGEELNYYAQKYPSYKEFVTDVSTALSSNWNKLETYDLTPSGWWSVLRQHGSCTVNDIV
GIIAAAYLWTIARELLTKNVFKPLANAAGLAKKEQEKAPECMWKLTVSTIAWLYSAFLVL
YQYDVFYHPSLAIKDWNLKCTVPWDLYIAYAAQLSFYVHSIYATAILDEWRKDSVVLLVH
HVFTILLLSSSYLFRYTHLGALVLFFHDFSDIFLELTKLTVYLKTKGGVWETRCETLSTA
GFIAFGISWFVFRLYWFPLKAIYVGAYVSYLRETEVPPFYFFTNGLMLALLAIHIWWFKF
IVLMAYKVSFGKNKEVKDPREYQKNGVTRNGFQKRKHA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgaagaattaaactattacgctcaaaagtatccgagttacaaagaatttgtt
actgacgtcagtaccgcactgtccagcaattggaataaattggaaacgtacgatcttaca
ccttcaggctggtggtctgttttgcgacagcacggctcatgtacagtaaatgatatcgtt
ggtataatcgcagcggcctatctatggaccatcgccagagaattgcttacaaaaaatgtt
tttaagccactggcaaatgcggccggattggcaaaaaaggaacaagaaaaggcgcccgaa
tgtatgtggaagctaactgtatccacaattgcgtggttgtattcggcgtttttggttctt
taccaatacgatgttttttatcatccctccttagcaattaaagattggaatctcaaatgt
acagtgccatgggatttgtacatcgcatacgcagcacagttgagtttctacgtacactca
atatacgccaccgcaatactagatgaatggcgcaaagattctgtagtgctgctagtacac
cacgtttttactattttgttgctttcttcctcttatttgtttaggtatacgcatctgggt
gcactcgttctattttttcatgacttcagcgatattttcctggaacttacaaagctgacg
gtttatttaaaaactaaaggcggggtatgggaaactagatgtgaaactttatctacagct
ggcttcatagcgttcggaatctcatggttcgtttttcgactgtactggttcccacttaaa
gcaatctacgttggtgcttatgtcagctaccttcgagaaactgaagtgccaccgttttac
tttttcacgaacggtttgatgctggccctgcttgccatacacatttggtggtttaagttc
attgtgctgatggcgtacaaagtgagcttcggaaaaaacaaagaagtaaaagacccgaga
gagtatcagaagaatggcgtcaccagaaacggatttcagaagcgaaaacacgcctaa
DBGET
integrated database retrieval system