Ciona intestinalis (yellow sea squirt): 100186496
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Entry
100186496 CDS
T01056
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100186496
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100186496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
MazG_C
Motif
Other DBs
NCBI-GeneID:
100186496
NCBI-ProteinID:
XP_026694201
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MLFSDQVEVLATWFKNWNECEQTVALYSLLKRVKKCQAKFLARCLEHFLTECGELIRIEE
EANDHEYLSRLFNEPRQSDIINNLLNHLPLLRPGNEIAKNKYLEILPVVLAHSVERSEYL
EESRQLLSYSLIHPAFDNKERNLLTSWMSGLNRAPRPEEEKLPPKPGEVPSEVSSTTNSL
EMGHHSNGLSDWNHNSVWEDSRSPTHSLEGYHNNSISPPSWQQESAPTPGGVGGGGGVSA
SNSLDNSQVGMGSNDAVADGMADVRSWLKTLRLHKYADLFSKMSYTDMMMLTQDKLDEQN
VTKGARNKIILSIKKLHERFKQLHSLENEILGGGSLRSALLELKSIIQTPIKSFQSSKVE
SDDVATGGGKKEVIEEGDIPAQYTRVMGKACTQLLVSKPDEENITLYMKLLERCIQHPAF
TETQKRRLQTWRQQVLKIYRSLPRNIRPPGPQRSQQGVGYPGLRRPISRSQFAPHMSASA
PRALNQLSSPPMRGIGINFQPQNVNWLSGSLSAATPQIDSSRKAASLDPRLGQRMFGGGE
GDESPNEINTRLDSLCLSVAEHALADGMDGISTL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgctttttagtgatcaagttgaagtccttgccacttggtttaagaattggaacgaatgc
gaacaaacagttgccctctactcgttgctaaaacgagtaaagaaatgccaggcaaagttt
cttgccagatgtttggaacattttcttactgagtgtggggagcttattcgtattgaagaa
gaggcaaatgatcatgaatatctttcccgtttatttaacgagccacgacaatcagacatt
atcaacaatttattaaaccacctgcctttactgagacccgggaatgaaattgcgaaaaat
aaatatttggagatattaccagttgttctcgcacattctgtggagagatcggagtatctt
gaagagtctcgtcagttactttcatattcgctgattcatcccgctttcgacaacaaagaa
aggaatttgctgacatcatggatgtctggactcaatcgagctccgagacctgaggaggaa
aaacttcctccaaaaccaggggaagttccatcagaagtctcttcaacaacaaactctctt
gaaatggggcatcattcgaatggtctcagtgactggaaccacaacagtgtgtgggaagat
tcaaggtctccaacccattccttagaagggtaccacaacaattccatttctcccccatcg
tggcagcaagaatctgctcccaccccaggaggagtgggaggaggaggaggagtttctgct
tccaactctcttgataattcacaagttggcatggggagtaatgatgccgtggcagatggc
atggcagatgttagaagctggcttaaaacattacggctacataaatatgcggatttgttt
agtaaaatgagttacacagatatgatgatgctaacacaggataaacttgatgaacagaat
gtcacaaaaggagcaagaaacaaaattattttaagtattaagaaactgcatgaacgattt
aagcaactacacagtttagaaaatgaaattcttggtggtggatctcttcgttctgctcta
cttgagttaaaatcgatcatccaaactccaatcaagagttttcaatcttcgaaagtcgag
agcgacgatgtcgccaccggagggggcaagaaggaagttatcgaagaaggggatatcccg
gctcaatacacgagagtcatggggaaagcgtgtactcaactgcttgtatcaaagccggat
gaggaaaatataactttatacatgaagctgctcgaaagatgtatacaacaccctgctttt
actgaaacacaaaaacgaagattacaaacgtggcgtcaacaagtcctgaaaatttatcgc
tcgctgccaagaaatattcgacctcctggaccccagaggtcacagcaaggtgtaggatac
ccaggtctccgacgtccaatcagtcgatctcaatttgctcctcatatgtccgcctccgca
cctcgtgctcttaaccagctctcctctcctcccatgcgggggattgggattaacttccag
cctcaaaatgttaattggctttctggtagtctcagtgcagccacacctcaaattgactcc
tcaagaaaggctgcttcgcttgacccaagactagggcaaagaatgttcggtggtggagaa
ggagatgaaagtccgaatgaaatcaacacgcgactcgattctttgtgtttaagtgtagca
gaacatgcattagcagatggcatggatggaatatcaacactctag
DBGET
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