KEGG   Ciona intestinalis (yellow sea squirt): 100186496
Entry
100186496         CDS       T01056                                 
Name
(RefSeq) protein Smaug homolog 2
  KO
K27396  protein Smaug
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cin03019]
    100186496
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     100186496
SSDB
Motif
Pfam: SAM_1 PHAT SAM_2 MazG_C
Other DBs
NCBI-GeneID: 100186496
NCBI-ProteinID: XP_026694201
LinkDB
Position
Unknown
AA seq 574 aa
MLFSDQVEVLATWFKNWNECEQTVALYSLLKRVKKCQAKFLARCLEHFLTECGELIRIEE
EANDHEYLSRLFNEPRQSDIINNLLNHLPLLRPGNEIAKNKYLEILPVVLAHSVERSEYL
EESRQLLSYSLIHPAFDNKERNLLTSWMSGLNRAPRPEEEKLPPKPGEVPSEVSSTTNSL
EMGHHSNGLSDWNHNSVWEDSRSPTHSLEGYHNNSISPPSWQQESAPTPGGVGGGGGVSA
SNSLDNSQVGMGSNDAVADGMADVRSWLKTLRLHKYADLFSKMSYTDMMMLTQDKLDEQN
VTKGARNKIILSIKKLHERFKQLHSLENEILGGGSLRSALLELKSIIQTPIKSFQSSKVE
SDDVATGGGKKEVIEEGDIPAQYTRVMGKACTQLLVSKPDEENITLYMKLLERCIQHPAF
TETQKRRLQTWRQQVLKIYRSLPRNIRPPGPQRSQQGVGYPGLRRPISRSQFAPHMSASA
PRALNQLSSPPMRGIGINFQPQNVNWLSGSLSAATPQIDSSRKAASLDPRLGQRMFGGGE
GDESPNEINTRLDSLCLSVAEHALADGMDGISTL
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgctttttagtgatcaagttgaagtccttgccacttggtttaagaattggaacgaatgc
gaacaaacagttgccctctactcgttgctaaaacgagtaaagaaatgccaggcaaagttt
cttgccagatgtttggaacattttcttactgagtgtggggagcttattcgtattgaagaa
gaggcaaatgatcatgaatatctttcccgtttatttaacgagccacgacaatcagacatt
atcaacaatttattaaaccacctgcctttactgagacccgggaatgaaattgcgaaaaat
aaatatttggagatattaccagttgttctcgcacattctgtggagagatcggagtatctt
gaagagtctcgtcagttactttcatattcgctgattcatcccgctttcgacaacaaagaa
aggaatttgctgacatcatggatgtctggactcaatcgagctccgagacctgaggaggaa
aaacttcctccaaaaccaggggaagttccatcagaagtctcttcaacaacaaactctctt
gaaatggggcatcattcgaatggtctcagtgactggaaccacaacagtgtgtgggaagat
tcaaggtctccaacccattccttagaagggtaccacaacaattccatttctcccccatcg
tggcagcaagaatctgctcccaccccaggaggagtgggaggaggaggaggagtttctgct
tccaactctcttgataattcacaagttggcatggggagtaatgatgccgtggcagatggc
atggcagatgttagaagctggcttaaaacattacggctacataaatatgcggatttgttt
agtaaaatgagttacacagatatgatgatgctaacacaggataaacttgatgaacagaat
gtcacaaaaggagcaagaaacaaaattattttaagtattaagaaactgcatgaacgattt
aagcaactacacagtttagaaaatgaaattcttggtggtggatctcttcgttctgctcta
cttgagttaaaatcgatcatccaaactccaatcaagagttttcaatcttcgaaagtcgag
agcgacgatgtcgccaccggagggggcaagaaggaagttatcgaagaaggggatatcccg
gctcaatacacgagagtcatggggaaagcgtgtactcaactgcttgtatcaaagccggat
gaggaaaatataactttatacatgaagctgctcgaaagatgtatacaacaccctgctttt
actgaaacacaaaaacgaagattacaaacgtggcgtcaacaagtcctgaaaatttatcgc
tcgctgccaagaaatattcgacctcctggaccccagaggtcacagcaaggtgtaggatac
ccaggtctccgacgtccaatcagtcgatctcaatttgctcctcatatgtccgcctccgca
cctcgtgctcttaaccagctctcctctcctcccatgcgggggattgggattaacttccag
cctcaaaatgttaattggctttctggtagtctcagtgcagccacacctcaaattgactcc
tcaagaaaggctgcttcgcttgacccaagactagggcaaagaatgttcggtggtggagaa
ggagatgaaagtccgaatgaaatcaacacgcgactcgattctttgtgtttaagtgtagca
gaacatgcattagcagatggcatggatggaatatcaacactctag

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