Ciona intestinalis (yellow sea squirt): 100186499
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Entry
100186499 CDS
T01056
Name
(RefSeq) rhomboid-related protein 2-like isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cin01002
]
100186499
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
100186499
Peptidases and inhibitors [BR:
cin01002
]
Serine peptidases
Family S54: Rhomboid family
100186499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
Atthog
Motif
Other DBs
NCBI-GeneID:
100186499
NCBI-ProteinID:
XP_002124734
LinkDB
All DBs
Position
Unknown
AA seq
295 aa
AA seq
DB search
MSHTDIQLEDQTTEVDAFNVTEEDGRIPDSCFTKLNKKLANLILTTDEQKLVYLKEYNCN
PPPLFMLCVSLAELVVFIYYAFQAEQKQWITISSGLTKSPLIYDPMHREEVWRFISYMFL
HAGIEHILGNVVLQLLFGLPLEMVHKSYRVAIVYISGVLAGSLASSIFDPFVYLVGASGG
VYALLGGYLSNVITNWSRLAFNGLHLLLVVIIVGVDLGFSIYRRVVVVEGGSPPVSLVAH
LAGGLAGVTIGYVFFSDYDKNILKDVRCWVCFAAYILCCGFAVFFNLFLSPAGTI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatacggatattcagcttgaagaccaaacgaccgaagtcgatgcttttaatgta
acggaggaagatggcagaattcccgacagttgtttcaccaagttgaacaagaagttagcg
aacctcatcttaacaacagacgagcagaagttggtttatttgaaggagtataattgtaac
ccaccccccctgtttatgttgtgtgtttcattggctgagttggttgtgtttatttactac
gcgttccaagcggaacaaaaacaatggataacgatatcttctggtttgacgaaatcccca
cttatatacgaccccatgcatcgggaagaagtttggaggtttatatcgtacatgttttta
catgcgggtattgaacacatcctgggaaacgtcgtgcttcagttgttgtttggcttacca
ctcgagatggttcataaaagttatcgagtggccatcgtttatatatcgggggtgttggcg
ggttcgcttgcaagttcaatatttgatccgttcgtttacctcgttggtgcctccggtggt
gtttatgcgttacttggaggttacttgtccaacgtcatcacgaattggtcacggcttgca
ttcaacgggttacatcttctgctcgttgttattattgttggtgttgatcttggattctcg
atttaccgaagagttgtcgttgttgaagggggttccccacctgtgtcgctggtcgcgcac
ctggcgggggggttagcgggggtaactatcggttacgtattcttcagtgattatgataaa
aatattttgaaagatgttcgttgttgggtttgtttcgcagcatacatcttatgttgcggg
tttgctgtgttttttaacttgtttttaagcccagctggaacaatttaa
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