Ciona intestinalis (yellow sea squirt): 100186501
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Entry
100186501 CDS
T01056
Name
(RefSeq) chondroitin sulfate synthase 3-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cin01100
Metabolic pathways
Module
cin_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
100186501
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100186501
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
100186501
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
100186501
Glycosyltransferases [BR:
cin01003
]
Glycan extension
O-Glycan
100186501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
100186501
NCBI-ProteinID:
XP_002122402
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MRARNMDKEKLLYRFLFSCAVGYFLGSFIIRRRTISINSDALTKRVDFLDSKKTVYSAES
SPQRLDLEPSAPKANLYIGLLSVGSNLETRVAASRDTWMTRSGAVIEVYANNNQSQSNIK
TIKLLGVDDNAYPPQKKSFSMLKYMHTAYVDKFDWFVRLDDDAYVDVDKLSMFLNRINSS
QPRYIGSPGYGKGKEDLLSDGDNYCMGGPGMVFSRALMRQLGPHLGECLQHMYTSHEDIE
VGRCVQKYTGIKCTTSWETKKIFFQNYNSGTYTNNIKDITAKQLDEGKIFHANKDPAYQY
RFHTMVLKRKIATILKRIAQAEKDIQIVSLQNGFSDDAGMNAHAQYRWSTIYNRDHYKAD
RSQPMKRMDPTLNHVLVEDTNTFIRVLQTRVNNEFAKLKEVDFINTYFVVNPLHSMDAIS
LLECKFSTGPGKPRTTQHVSVHQRHRFTSATFLSEPIELCPTGCVRKDNEPTVLIKRANE
TPVNFLTALSGRPENFIRFLNNFENSFLTRGEKVNLIVTYFPPEYEVDITTNSSQEIVEV
DGISPNFGKNTPLGPDAKFVTENMNRLQNAYPDSKIAVINLEPGTEFSRGLGLQVAAKSV
ESRDEIIFFSDVDLVFAPEILDHIRRNTIRHKQVYYPVFFSQYDPDVVYVDMPKPQNYFI
FSELAGFWRHFSYGMVSLYASDFDKTNGFDLSIHGWGLEDVHLVNAILAAGLDVFKSTEP
GQVHIFHDKTCDSSLSENQRTSCQNSRAAHYAPSTLLYYLWKTPESIETIEEV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgagaaacatggataaagaaaaacttctgtacaggtttctgtttagctgcgca
gtcggctatttcctcgggtcttttataatacgaaggcgaactatttcgattaattcagac
gcactaacaaaacgggtggactttttggacagcaagaaaacagtgtacagtgctgaaagt
tctccacaacggttagatctggaaccttctgcaccaaaagcgaatttgtacatcggttta
ctttctgttggttcaaatttggaaacacgggtagcagcgtcacgtgatacatggatgacg
cgatcaggagcagttattgaagtttatgccaacaataaccaatctcaaagcaatataaag
acaatcaagttacttggtgtggacgataatgcatacccgccgcaaaagaagagcttctca
atgctaaagtatatgcacaccgcatatgtggacaaatttgactggttcgtacgtttggac
gacgacgcatacgtagacgtggataaactatctatgtttctaaatcgaattaattcttcc
caaccgcggtatatcggaagtcctggttatggcaaaggaaaagaagacttattgagcgac
ggcgataattactgcatgggtggtcctggcatggtgttctctcgtgccctcatgcgacag
cttggcccgcatcttggggaatgcttacaacacatgtacacgtcacatgaagacatcgaa
gtcgggcgctgcgtacagaaatacacgggcatcaagtgtacaacttcgtgggagacgaaa
aagatcttcttccagaactataacagcggaacttacacgaataacataaaagacattacc
gctaaacaactcgacgaaggcaaaatattccatgcgaataaggatccagcgtaccaatat
cgcttccacacgatggtgctaaagagaaagattgccaccattttgaaacgtattgcccaa
gccgaaaaggacattcaaatagtttcgctacaaaatggattttcggacgatgctggcatg
aatgcgcatgcgcagtaccgatggagcacaatttacaaccgtgaccattacaaagccgat
cgttctcaacctatgaaacgaatggatccgactttaaaccatgttttggtcgaagatacc
aatacctttatacgggttctgcaaacgcgagttaacaatgagttcgccaaactgaaggaa
gtagattttattaatacttactttgtagttaaccctttgcattcaatggacgctatatca
ctactggaatgcaagtttagtacagggcctgggaaaccacgtacaacgcagcatgtttcg
gtccaccagcggcaccgtttcaccagcgctacgtttctaagtgaacccattgaactatgc
ccgaccggttgtgttagaaaagacaacgagccgacagttctaatcaaaagagcaaacgaa
actcctgtaaatttcctgacagctttgagtggcagacctgaaaatttcatccgatttttg
aacaattttgaaaactcgtttttgacccgtggggaaaaggtgaaccttattgttacttac
tttccgcctgaatacgaggttgatattactactaattcgtctcaagagattgtggaggtg
gacggtatctcgcccaattttgggaaaaataccccactcggcccggacgctaaatttgtg
actgaaaacatgaacagattgcaaaacgcatatccagattcaaagattgccgtgatcaac
ctcgagcccggaacagaattttcgcggggactcgggctccaagtcgccgcgaaaagcgtg
gagtcccgcgatgaaattatattttttagcgacgtggatttggtgttcgctcccgagata
ctggaccacatacgcagaaacacaatacgacataaacaggtctactacccagtatttttc
agccagtatgacccggacgtggtatatgttgatatgccgaaaccacaaaactatttcatc
ttcagcgaattagctggattttggagacacttcagctacggaatggtttctttgtacgcg
agtgatttcgacaaaacaaacggttttgatctctcaatacacggttggggattagaagac
gtacacctggtaaatgcaattttagccgctggtctagatgtttttaaaagcacagagcct
ggacaagttcacatttttcacgacaaaacatgcgacagctccctcagcgaaaaccaacga
acgagttgccagaattctagggccgcacattacgccccttcgacattgttatactacttg
tggaaaactccagaaagtatcgagacaatagaagaagtttaa
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