KEGG   Ciona intestinalis (yellow sea squirt): 100186513
Entry
100186513         CDS       T01056                                 
Name
(RefSeq) splicing factor 3A subunit 1-like isoform X3
  KO
K12825  splicing factor 3A subunit 1
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100186513
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cin03041]
    100186513
Spliceosome [BR:cin03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100186513
 Complex B
    100186513
 Complex C
   U2 SnRNP specific factors
    100186513
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2
Other DBs
NCBI-GeneID: 100186513
NCBI-ProteinID: XP_002131185
Ensembl: ENSCING00000008526
LinkDB
Position
11:complement(4456452..4466336)
AA seq 754 aa
MAPMAVVPAEDIRVSGDAPEPDAEESQSNKPIIGIIYPPPEVRNIVDKTASFVGRNGPEF
EARIRQNEINNSKFNFLNATDPYHAYYRHKVKEFIEGKGKEPVAPKPVVPTVKPSVAVVQ
EQFVPKDPPTSFEFTFDPPSISAYDLDVVRLTAQFVARNGRSFLTQLMQREAKNYQFDFL
RPQHSMFQYFTKLVEQYTKVFIPPKNVLSKLKNETPKSILEDVKYRVAWTKHEDRAKQRE
KQAVEKERAMYAQIDWHDFVVVETVDFHPEERGNFPRPVSVEELGTRLLQQERIEKYGEQ
EPEETGGKEDKEESGSEEETQEEQPQLVDMDMEESSEEETEPEPAPIPRRPPVQPAPPIK
APMSRDDVIIRSNYNPKNKETLDSRKKWGSNFMVSPITGERVPADKFQEHMRYGLLDPNW
KELKKKQIAEKQQEEEVFAPGGDIEASLRGLAERRTDIFGVEETGIGQKVGEEEIAADDK
VTWDGHSGSMEKTQRQAQSGVTSEEVQHHVKMTHGLLEDSTLEKIGPKGGDGKSSVSTEP
TPTPVQTPNVQIQVNRQPQVLTQVVMRPTVIPVQRPNPPVLVVQQPMRVVRQPQPQLIAV
QRPQMMMSHTMGQPQLIQQIQPMQQMQQIHPLQSQMMDGPPQAKKARTEADLMPAQTFLQ
MSNGPVTFHVNCPNAPDKNEWNLVGQTLTFTLPLTDEVSVIKAKIHESTGMPAGKQKLQL
DGLFIKDSNSLAFYNMTSGSTVGLQVKERGGRKK
NT seq 2265 nt   +upstreamnt  +downstreamnt
atggcaccgatggctgttgttccagcagaagacattagggtatctggagacgccccggag
ccagatgcagaggagagtcaatccaacaaaccaatcatcgggatcatataccctcctcct
gaggttcgtaacatcgtggataaaactgcgagcttcgtgggaaggaatgggccagagttt
gaagcgagaattcggcaaaatgagatcaataattcaaagtttaacttccttaatgcaact
gatccgtaccatgcttattatcgacacaaagtcaaagaattcattgaagggaaaggaaaa
gaaccagttgctcctaaaccagtagttccaactgtaaagccatctgtggcagttgttcag
gaacaatttgtccccaaagatcccccaacctcgttcgagttcacattcgacccaccttct
atatctgcttatgatttggacgttgtgaggttaacagctcagtttgttgcgcgtaacggt
cgttcgtttctgacgcaactaatgcaacgggaagcgaagaattatcagtttgattttctc
cgacctcagcattctatgtttcaatacttcaccaagctagtggagcaatatacaaaggtg
ttcatcccaccaaagaacgtgctttccaaactcaagaatgaaactcctaaaagtatcttg
gaagatgtcaagtacagagtagcttggacgaaacacgaggatcgagcgaaacaaagagag
aagcaagctgttgaaaaggagagggcgatgtacgcgcagattgattggcacgactttgtt
gtcgtggaaacggtggatttccatccagaggagagaggtaactttccacgtccagtatcg
gttgaagagcttggcacacggttgttacaacaggaacgcatagaaaagtacggggagcag
gaaccagaagaaactggaggaaaagaggataaagaggagagtgggagtgaggaggagaca
caggaggagcaaccacaactggtggatatggatatggaagaaagttccgaggaagaaacc
gaacccgagccggcccccataccacggcgaccccctgttcaacccgcaccccctattaaa
gcccccatgtctcgcgatgatgttattatcaggtccaactacaacccgaagaataaggaa
acattggattcaagaaagaaatggggcagcaacttcatggtgtcacccatcactggtgaa
agggttcccgctgataagttccaggagcatatgaggtacggacttctagatcctaactgg
aaggaattgaagaagaagcagattgctgagaagcagcaagaagaagaagtgtttgctcca
ggaggagacattgaggcttcgttgagaggactcgctgagaggagaacggatatctttgga
gtggaagagaccgggattggacagaaagttggtgaggaagaaattgctgctgatgataag
gtgacatgggatggtcattccggttcgatggagaagacgcaacgacaagctcaatcagga
gtaacaagtgaagaggtccaacaccatgtaaagatgacgcatggattgctggaagattca
accttggagaagattgggccaaagggcggcgatggtaaatcttctgtttctactgaacca
acaccaacaccagttcaaacacccaatgtacaaatacaggtcaaccgacaaccacaggtt
ctcacacaagtagtcatgcggccgactgtcatccccgtgcaacgacctaacccacctgtg
ctggtggtccaacaacctatgcgtgtcgtacgccaacctcaaccacaactaattgccgta
caacgcccgcaaatgatgatgtcacacaccatggggcaaccacagttgatacaacagatt
caaccaatgcaacaaatgcagcaaatccacccacttcagtcacagatgatggacggtcca
cctcaagcgaagaaagctcgcacagaagccgatctcatgccagcacaaaccttcttacag
atgagcaatggtcctgtaacattccatgtgaattgtccaaacgcaccagataagaacgaa
tggaatttggtcggacaaactcttacttttacactcccacttactgatgaggtatcggtt
atcaaagcaaagattcacgaatcaacaggaatgcccgctggcaaacaaaagttgcaactg
gatggtctgttcataaaagattcaaattctttggcgttttacaacatgacatcgggttct
actgttggactgcaagtaaaggagagaggcggaaggaaaaaataa

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