Ciona intestinalis (yellow sea squirt): 100186601
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Entry
100186601 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100186601 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100186601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100186601
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100186601
Membrane trafficking [BR:
cin04131
]
SNARE
Syntaxin (Qa)
Stx-PM
100186601
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100186601
Exosomal proteins of other body fluids (saliva and urine)
100186601
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Lzipper-MIP1
Herpes_US9
Synaptobrevin
DUF4714
COMMD1_N
Motif
Other DBs
NCBI-GeneID:
100186601
NCBI-ProteinID:
XP_026696485
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Position
2:3947273..3952343
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AA seq
389 aa
AA seq
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MLRDRLPDLLRLAESDPTLYKEPEYHEELPIDPSLIVLFQRAEKVTKFIKDMEAIVQEMV
RQHEDITWNILNEKQYREQTTRTMDRFSALARKTKTILRRMELSDKEMLHYSAYARDGHD
SRDDISVKWEQTSSSVQTPSKWFKLFNSSHNQLKNVSWHRLGSGTVLPFSDNTYLPCELR
MQMLLHSVLSYRLVVVVREYYTTQKIYNENVRKRIERQMSIIGREMDRQEIDKAIEVGES
VSLLHGDIVDDTQVSKEMRAKLREIQFFEHEILALEKSISQLHEAFLMVSSLVHEQGAMV
DRIEHHVGLASNYVEVSNQMLKKAGKLQHKYRKKKLCLALLILTAIGIIVLVIALSVKRK
RTTVRVVTHSVAHPRLRRDEDWFSLTELF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtgaccgattgccagatttgcttcgtttggctgaaagtgacccaacactttat
aaggaaccagaatatcatgaagaattaccaatagacccttctcttattgttttatttcaa
agggcagaaaaggtgacaaaatttatcaaggacatggaagcaatagtacaagagatggtg
agacaacatgaagatatcacttggaacattttaaatgagaagcaatacagagagcagaca
actcgaaccatggatcgtttcagtgcactcgctcgaaaaaccaaaacaattcttcgtagg
atggagcttagtgataaagaaatgctccattactcagcatatgcaagggacggccatgac
agcagagatgatatcagtgtaaagtgggaacagacttcttcaagtgttcagacaccatcc
aagtggtttaaattgttcaactcatctcataatcaacttaaaaatgtttcttggcaccgc
ctagggtcaggtacagtgttgccattttccgacaacacatacctaccttgtgaattgcga
atgcagatgctcctacacagtgtcttatcctacaggctggtagtggttgtacgggagtat
tacaccacacagaaaatctacaacgaaaacgtccgcaaacgaattgaaagacaaatgtca
ataattggccgtgaaatggatcgccaagaaattgataaagcaattgaagttggagagagc
gtttcacttttacatggagacatagtggatgatacacaggttagcaaagagatgagagca
aaactaagagaaatccaattctttgaacatgagattcttgcattggagaaaagcatcagc
caactacatgaagctttccttatggtttcctcgcttgtgcatgagcagggggctatggtt
gatagaattgaacaccatgttggtcttgcttctaactatgtcgaagtgagcaaccaaatg
ctcaagaaagcaggcaaactgcagcacaagtatagaaaaaagaagctctgccttgcgctc
cttattctcactgccattggcatcattgtccttgttattgctctttcagttaaaagaaaa
cggaccacagtacgagtggtgactcactcagttgctcatccaaggttaagaagagatgag
gactggttttccttaactgaacttttctag
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