Ciona intestinalis (yellow sea squirt): 100186654
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Entry
100186654 CDS
T01056
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00071
Fatty acid degradation
cin01212
Fatty acid metabolism
cin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
100186654
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100186654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cin03029
]
100186654
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
100186654
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
100186654
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Carn_acyltransf
DUF4283
Motif
Other DBs
NCBI-GeneID:
100186654
NCBI-ProteinID:
XP_002121679
Ensembl:
ENSCING00000003785
LinkDB
All DBs
Position
7:5804596..5816466
Genome browser
AA seq
716 aa
AA seq
DB search
MANQTWNIIMGFVIPIVLGVMTMSIIPGLSGVNDKLIRTLVGGGVVVGFYFLFKFLKWEL
IRKLLEYREWMYDHHSFKTKAWGILLKLLIPKNVKLFQLEKYLPKYPLPKLDDTCDKTLT
MVKPLLSDEEFKKVSETMEDFRKNEGPKLQKVLEKRYDETENWLAELWNKYLYLGSRGPL
PVHSNYCCLGDRAFQYNDPGSNQLSQMANCIYYFMEYMGKINNGSLAGMMIQNIVPICCD
RYRYLCATTRIPGETIDELKRFPNSTHVIIFRKGLMYKLDLKVLDSEGKRTFLTPTEIQG
QLKVIMEDADLMGSKVEGEIQNPSIFTTTERTRWARIRNRMLVNRTNMESLNIVESSAFC
FVLSEDTPQNHSEEFASYLTGNGFDRWFDKSFTFIVNKNGAMGFNVEHSTSEATLGGRMW
EYTLFHCKYNVHGDPVDPRPPTHPTLHDPRQLKWDLTEFKDEIADIKTEWDKLANNVDAC
VYYMNKGKGIAKKMKLSPDGFLQMALQLAFYRERKITPKTYETAATRLFKYGRTETIRPV
SEHSVAFTKCFDDPSVPDSVKIKHLKSAIKHQTTYKFDATNGRAVDRHLLGLYFAGKFTG
NVPELFKLKPFYESDLLSTSQSPLRYDPVIGKISTTDPIGGGFGAQRVDGYGVSYFMLEN
KVHFLITSFKSCSETNSLKFGQNIERAVNDLQVLLAGGNQQKSNKETNGSVGKGDK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcaaacatggaacatcataatgggctttgttattcctattgttctcggagtt
atgacaatgtcgattatcccggggttaagtggggtgaacgacaaacttatccgcacactg
gttggtgggggggtggtcgttgggttttatttcctgtttaaattcttgaagtgggagttg
ataaggaagttgcttgaatacagggaatggatgtacgaccatcacagttttaaaactaag
gcatgggggattctattaaagctgttaatcccgaagaacgtaaagctgttccaactcgaa
aaatacctccctaaatatcccttgccaaaactggatgacacatgtgacaaaaccctgacg
atggttaaaccgttgcttagcgacgaagagttcaagaaagtttccgaaacaatggaagac
ttccggaaaaacgaaggtccaaagctacagaaagttttggaaaagcgatacgacgagacg
gagaattggctggctgaactttggaataaatatctttaccttggaagcaggggaccttta
cctgtccattccaactattgctgcctcggtgatcgagcgttccaatacaacgacccgggg
tccaaccaactcagccagatggccaactgtatttattacttcatggagtacatggggaag
attaataatggatcgctagcaggcatgatgatacagaacatcgtccccatatgttgcgat
cgatatcgatacttgtgcgctacaactcgtatacccggtgaaaccatcgatgaattgaaa
aggtttccaaactccacacatgtcatcatattcagaaaaggtctgatgtacaaacttgac
ctcaaagttttggattccgaggggaaacgaacttttttgaccccgaccgagatccagggt
caacttaaggtcataatggaggatgctgacctcatggggtcaaaggtcgaaggtgaaatt
caaaacccgtcaatttttacgacaacggagagaactcggtgggccaggattcgcaacaga
atgttggtgaaccgaaccaatatggaaagtttaaacatcgtagaaagttccgcgttttgt
tttgtgctcagtgaagataccccacagaaccacagcgaggagttcgcgtcttacctcacc
ggcaacggatttgaccgctggttcgacaaatcgtttacttttattgtgaataagaacggg
gcgatgggattcaacgtggaacattcaacttcggaagctactctcggcggacgcatgtgg
gagtacacgttgtttcattgtaaatataatgtccatggtgaccccgttgacccccgaccc
cccacccatcccaccctccatgaccctcgtcaacttaaatgggatctcaccgagttcaaa
gatgaaatcgcggacattaaaactgaatgggataaactggcaaacaacgtcgacgcatgt
gtctactacatgaacaaaggaaaaggaatcgcaaagaaaatgaaattaagtcccgatggt
ttcctacagatggcgctacaactagcgttttatcgggaacggaaaattacgccgaaaact
tacgaaactgcggctacaagattatttaaatacggtcgaactgagacaatacgtccggtg
tctgaacattcggtcgctttcactaagtgttttgacgacccctctgtccctgactctgtg
aagatcaaacacttaaaatctgcgataaaacatcagaccacgtacaagtttgacgcaact
aacggtagagctgtagatcgccacctactgggactttacttcgctggaaagtttacaggg
aatgtgccggagttgtttaaacttaagccgttctacgagtccgaccttctctccacctcc
caatcacccctacgatacgaccccgttatcgggaagatttcgacaacggaccccataggg
ggcggatttggggcacaacgagtggacgggtacggggtgtcttacttcatgctagaaaat
aaagttcatttcttgattacaagcttcaaaagttgttcggaaacaaactcgttgaaattt
gggcaaaacattgaacgggccgttaatgacctccaggtgttgttggcgggaggaaatcaa
cagaaatccaacaaagaaacaaatgggagtgtggggaaaggagacaagtga
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