Ciona intestinalis (yellow sea squirt): 100186678
Help
Entry
100186678 CDS
T01056
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X2
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100186678
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
100186678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
100186678
NCBI-ProteinID:
XP_002119653
Ensembl:
ENSCING00000007103
UniProt:
A0A1W5B6S5
LinkDB
All DBs
Position
7:3061758..3074794
Genome browser
AA seq
1124 aa
AA seq
DB search
MKRHKKGEPTDSHDRGHHHRHHKSDRRKEAIDEKYVSTRKRSPQSSSSSVVREDVGGKKR
KRKSSSYSSSSSFESPASRHKMKKQRYKSPSPKGKTKPKKDHERGRSREKKSRKSKDNEK
IHESHDLHRSQSSASSKNVYHESHEQHKYKDDRSRSGKPTNEPKQKAISKVAHSDSVKKS
QWRQESEYESSTDEWSSGKKPEKKHKEEKTHKKHKKEVIQDPPREKQKKKSKEQEVERTL
KSRQPLKHEIDERTSSSRDGRRHEEDYDRTHARESKEKYERYEDDSCSDGGGKKKNKLKK
RKKQKIEEEKPRNVSRKRSRQRSEERSPEMTKSKKVKKHHHHDEDYTSGSEMESTGSRRK
DVRVARVDAEWKTVDDIADNHQQHHKSERSYSSQKTRSYPEVQHPREDRPPRYEAAKHPS
QERIDYPPHPKARMERTPEQRVERAPDRRERSPERRREPTPEVRRERSPKHRRDQTPEMR
RERSLERRPDDRQKFKMREDKSVERRRHEEEFYKPRDAERSSEYPRPRDRKVEKYEIREK
IPPSGRYDERKSDRKFDGSQERIPEKIRESPRFYEKQAAPRYPDKQFEGRDMRFNDRRYE
DVGRSRRQDFPPEGVQRTQKIIKVDREVLVRDHRGREEVRAKERKILDPRGGRSDFPPQR
TASWDSDRERKMRPRSSQDYEEPQRISSWVDGRDGAKLRIEARDSFGREKWTPEVSRHRV
EDRKVEVDFGRGRPERSVPRERGQFPSDRTPPPASRFTREVRQSGEPRSRDLGLEVTIHD
GGGRSSITHESSSKSRASPPRHVSYDSSRGKRMYDSSKERASHPNIHRERSNSETRRPDK
QGRRDDYSSSHAHLRAHESTRQSVNELIDRTRHHSRSIDTKSQPSPSSHKDDVNKSKRSI
HEREHSSASRSPRRSRHGHHSSHNSNDREKLERKSSRTKSSRDSRRSGSEARGKSKEEKK
SESKGEKVKPSKAADVLEVDWPSLSPDKEINEPEPDSILNRFTPGNVLLNMGVSTKLLPA
HLLEKVSNLCGKNNNISDSRPLVTTHGLGALNRNESLRHTAWHSVFKARPSRVTTYDDLK
FRVRVLHRTEFPPPPTTPPTIINTKSYAASIKHFVSKIKPLEVQ
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagacataaaaagggtgagcctacggactctcatgatcgtggccaccatcataga
catcataaatcggatcgcagaaaggaagcaattgatgagaaatatgtttcaacaagaaaa
agatctccacaatcttcaagttcaagtgtggtaagagaagatgtgggagggaagaaaagg
aaaaggaagagctcttcatattcatcatccagctctttcgagtcccctgcttcacgccac
aaaatgaagaagcaacgttataaaagtccctctccaaaaggcaaaacaaaaccaaagaag
gaccatgaacggggcagaagccgtgagaaaaagtcgcgaaaatctaaagataatgaaaag
atacacgaatctcacgatttacatagatcacaaagttctgcctcaagtaaaaatgtgtat
catgaatcacatgagcaacataagtataaagatgaccgatcgcgaagtgggaaaccgact
aatgaacctaaacaaaaagcaatttcaaaagtagctcactccgattccgtgaagaagtcc
cagtggaggcaggagagcgagtatgagtcctccactgacgaatggagcagcgggaaaaag
ccggagaagaagcataaagaggagaagacacacaagaagcacaaaaaggaagtaatccag
gatcctccaagagagaaacagaaaaagaagagcaaagagcaagaggttgagaggacctta
aagtcacggcaacctttaaagcatgaaatagatgagaggacatcttcttcaagggatggg
aggagacatgaggaagattatgatagaactcatgctagagagtcaaaagaaaaatatgaa
agatatgaagatgacagttgtagtgatggaggtggaaagaagaaaaataaattaaaaaag
aggaaaaagcaaaagattgaggaggaaaaaccaagaaatgtttctcggaagagaagtcga
cagagatcggaggaaagaagtcctgagatgacaaagagcaagaaagtgaagaaacatcat
catcatgatgaggattatacatccggaagcgaaatggagagcacgggatcaagaagaaag
gatgttcgggtcgcaagggtggatgcagagtggaagacagtggatgacatcgctgataat
catcaacaacaccacaagtccgagagaagctactcctcccagaagactcggagttaccct
gaagtccaacatccaagggaagatcgcccaccgcgatatgaagctgcgaaacatccttcc
caagagaggattgattatcctcctcatcctaaagccaggatggagaggacgccagagcag
agagtagagcgtgctccggatcgtagggagagaagtcctgagcggaggagagagccaact
ccagaggtaagaagagaaagaagtccgaagcacagaagagatcaaactccagagatgagg
agagaaagaagtctggagcgaagaccagatgatcggcagaagtttaagatgagagaagat
aaaagtgtggagagaaggagacatgaagaggagttttataaacctcgggatgcagagagg
agttcggagtatcctcgtccccgggatcggaaggtggaaaaatatgaaatacgggagaaa
atcccacctagtggtcggtatgacgagaggaagtcggatcggaagttcgacggaagtcag
gagagaattccggaaaaaatccgagaaagtccgagattttatgagaaacaagcggctccg
agatatccagataaacagtttgagggaagagatatgaggtttaatgatcggaggtatgag
gatgtgggaagatcaagaaggcaggactttcctccggagggtgtgcagaggactcagaag
atcatcaaagtcgacagagaagttctagtgagggatcatcgcggaagagaggaagtgaga
gcaaaagaaaggaagatacttgatccgagaggtgggagatcggatttcccgcctcagagg
acagcttcttgggactcggatcgagagaggaagatgagaccaaggtcctcccaggattat
gaggaaccgcagaggatttcatcatgggtggatgggagagacggagcaaaattacggatc
gaggcgagggatagttttggacgtgaaaagtggacaccggaggtcagtagacatcgagtc
gaagatcgaaaagtggaggttgattttggaagagggagaccagagaggagcgttcctcga
gagcggggtcagtttcccagcgatcgaactcctcctcctgcctcccgcttcaccagggag
gtacggcagagtggggagcctcggagcagagatcttggactggaggtcaccatccatgat
ggaggaggaagatcgagtatcactcatgagagcagcagtaagtcacgtgcatcaccgcca
cgtcatgtatcatatgattcatcacgagggaagaggatgtacgattcatccaaggagcga
gcctcgcatcccaacatccatagggagcgtagtaactcggaaactagaagacctgacaaa
caaggtcgtcgagatgattactcgtcatcgcatgctcacttgagggcacatgagagcact
cgacagagcgtgaacgaactaattgatcgaacacgccaccatagtcggagcattgacaca
aaaagtcaaccttctcccagctcacacaaagatgatgtgaataaatccaaacgttcgatt
catgagcgtgaacattcatctgcatcacggtcaccacgccgatcacgtcatggtcatcat
tcatctcataattcaaatgatcgtgaaaaattggaacgaaaatcttcacggacaaaaagt
agccgagattccagacgctcaggaagtgaggcgcgtggaaagagcaaagaagagaaaaag
agtgagagcaaaggagaaaaagtgaaaccaagtaaagctgctgatgttcttgaagttgat
tggccgagcttgtcacctgacaaggaaatcaatgaaccggaacctgattcgattttaaat
cgttttacaccaggtaacgtgcttctaaatatgggagtgtctacaaagctactaccagca
cacttgctggagaaagtatcaaacttatgcggcaagaacaataatatatcagacagcaga
cccctcgtgaccactcatgggttaggtgcactcaaccggaacgagtcgttacgtcatacg
gcgtggcattcagtgttcaaagcacgcccgtcacgcgtaactacttacgacgaccttaaa
ttccgtgtccgtgttctgcatcgcactgagttccccccacccccaactacaccgccgaca
atcataaacacaaagtcgtatgctgcttctatcaaacacttcgtcagtaaaattaagccg
cttgaggtgcagtga
DBGET
integrated database retrieval system
