Ciona intestinalis (yellow sea squirt): 100186701
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Entry
100186701 CDS
T01056
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X2
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100186701
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100186701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
SAP
Dicer_dsRBD
SAP_new25
HeH
Motif
Other DBs
NCBI-GeneID:
100186701
NCBI-ProteinID:
XP_002128212
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MLSIVARTRRKSRFAEKIIRLSLYNRTITLTNMEKYRNMKVAELKAILKQNNLSSKGNKK
QLLTTIETYICETPVESADIMDPNTSVAVKQEVTTAVLSNLPEPVVKKEDFVEKASNEQS
VPTTIDEELTALELQRPSFEEPAGAPPTKRKSPAFTPPPLKAKKKKKSKCPPQQKNSIML
LNELQPGLKYDLIEQTGNGTSTRFTFQVVFRGEIYKGSGVNKKMAKHEAAKAALSRQIQF
ENPHLVANCFIPNLPPTIDFTSDAIESEFPTSFVQGPMSGAEISEHPMPPLVNVAEPPTQ
TPQQEVFKSVSPTHNSQGKNPVQLLNEMVGPGIQYNCVDRVGDQKSHYFTMEVCLNGRAY
QGQGKNKKLAKAGVAMRILREVYEIDMASPDQQAVKSNMDGIEVDAGKLPDIVFQLVQQK
FNSIVEGLCGEQDYSKHKVLAGVVMTRKMDPNIDEGTVVSVATGTKCINGEYISDQGSAL
FDCHAEIVAKRGLRKFLYEQLLSLPQTTDPIFEELPTGGYKVKPDVYFHLYINTSPCGDA
RIFSPHETKDGDNHPNRKSRGQLRTKIENGEGTIPVEEDKLVDENNRGNMQQTWDAVIGG
ERLLTMSCSDKIAKWNVVGIQGSLLSMYIEPVYLSSIILGSLYHVEHFNRAVFMRSKEAI
EAISDEYQITSPYRVHRPLLAAVCNPMKRVAKKAPTFCVHWSMPDVSPQVINTSRGRQIG
GDEPVSDLCKKQMFKRFLHLVEQKELSQRTRFPSYKEETYAELKSLSKEYQVVKNNLLKG
FGKSSCGKWVGKPSEVDMFIST
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaatagttgctaggacacgaagaaaatccagattcgcggaaaaaataattcgc
ttgtcattatataatcgcacaatcacgttgacgaacatggaaaagtatcgaaacatgaag
gttgcagaactgaaggcaattttgaagcaaaacaatctttctagtaaaggcaacaagaaa
caactcctgaccacgattgaaacttatatttgtgaaacacctgtggaaagcgctgacata
atggatccgaacaccagtgttgctgtaaagcaagaagttactacagcggtcttgtccaac
ctgccggaacctgttgttaaaaaagaagattttgtagaaaaagcttcaaatgaacaaagt
gttccaactacaattgatgaagaacttacggccttggaacttcaacgaccttcgttcgag
gaaccagcgggggctccccctactaaacgtaaatccccagcatttactccgcctccatta
aaagcaaaaaagaagaagaagagcaaatgtcctccgcaacaaaagaattcgatcatgttg
ttaaatgaattgcaaccaggtttaaaatacgacttaatagagcagactggcaatggaaca
tcaactcggtttactttccaagttgtgtttagaggtgaaatatacaagggtagcggagtt
aacaagaagatggcgaaacatgaagctgcaaaagctgcgttgagtcgtcagatccagttc
gagaacccccacctagtggccaattgtttcatccccaatctccccccgaccattgacttt
acatccgatgccattgaaagtgaatttccaacttcctttgtgcaaggtcccatgtcagga
gcagagatatcagaacacccaatgcctccattggttaatgtggccgaaccaccaacacaa
acccctcaacaggaagttttcaaatcggtttcaccaacacataactcacaagggaagaat
ccggttcaattattaaacgagatggtcgggccagggattcaatataattgtgtggatcga
gttggtgatcagaagtcacattacttcactatggaagtttgtttaaatgggagggcttat
caggggcaaggcaagaataagaaactcgcgaaagctggtgtggccatgcgaatactacga
gaggtttacgaaattgacatggcctcccctgaccaacaagctgtgaaaagcaacatggat
ggtattgaggtcgatgctgggaaactaccagacattgtgtttcaactcgtgcaacaaaag
ttcaattccatcgtcgaaggtttatgtggagaacaggattattcaaaacataaagtactc
gctggtgttgtaatgacaagaaagatggacccaaatattgatgaaggaactgtagtatcg
gtggccaccggtacaaagtgcataaatggggaatacatatcagatcagggttcagccttg
tttgactgccatgcggagattgtagcaaaacgcggcttgaggaagttcctttatgaacaa
ttgctttcattaccacaaacaacagatcccatatttgaggagcttccaactggaggttac
aaagtgaaacctgatgtttattttcacctttacatcaacacctcaccttgtggagatgca
aggatattctccccgcatgaaacaaaagacggcgacaatcacccaaatcgtaaatctcgt
ggtcagcttcgtacaaagatagagaatggggaaggcacgatacctgttgaggaagataaa
cttgttgatgaaaataaccgaggaaatatgcaacaaacatgggatgccgtgattggaggg
gaacgactgcttacgatgtcatgtagtgataagatcgctaaatggaacgtggtcggcatc
caaggttctctactatccatgtacattgaaccggtttatctatccagtattatacttggt
tcattatatcacgttgaacatttcaaccgagccgtcttcatgagatcgaaggaagcaatc
gaagcaatatccgacgaatatcaaataacttcaccataccgcgtacacaggccattattg
gctgctgtttgcaatccaatgaaaagagtcgccaagaaagcccccacgttttgcgtccat
tggtcgatgccggatgtttcaccgcaagttataaacacttcaagaggccgacaaatagga
ggggacgaacccgtttcggatctttgtaagaaacaaatgtttaaacgttttctacacttg
gtggagcaaaaggaactttcacaacgaacaaggtttccaagttataaagaagaaacttac
gctgagttgaaaagtttgtccaaggaataccaggtagtgaaaaacaatctcttaaaaggg
tttgggaaatctagctgcggtaaatgggttgggaagccatcggaggttgacatgttcatt
tcaacttaa
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