Ciona intestinalis (yellow sea squirt): 100186719
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Entry
100186719 CDS
T01056
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100186719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100186719
03036 Chromosome and associated proteins [BR:
cin03036
]
100186719
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100186719
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100186719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
T7SS_assoc-like
baeRF_family11
Motif
Other DBs
NCBI-GeneID:
100186719
NCBI-ProteinID:
XP_002124857
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All DBs
Position
4
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AA seq
1168 aa
AA seq
DB search
MFTPSRKRTGPSSSGRRSNISLNTTPRLNSSLRTSGTSRASLLRKSFAGRSPAVGSTSLI
SSSSPTVTSVFNATHHNIESYPSSLPVLITEAITQADDFSDISASLGENGWSIVVIKQQL
FVWAHKPSGYVKTTVCKELRLPAPEDDLMHTSSNVCLDVDEDSAAVSVLAVTNNFHVQHW
PNILTSTSNCNELKHEAFVENETCFNITSIQPYGFLVTTTTGAVYQLQTTKNHLICHQLH
TPKSLMSGISRRVSSFFFTPSQESIKIVQSFTKPTKIVGEFEMLILTSNSLQQWKVSAGN
TEQATMQMVNEMDLQAVLAPKLKTNNSSSSVKIWPLDVMRASRKKHVTCLVGFSQSESTV
KFALCVFTDLGKQDVDIVMIEHSSVAEVSDPHYYPSYKLVIEDPSSRFIDHIAIWCGEQL
ILKSLTVDGRSKMEDTIPFSNSGDKLVGAGQCDGRYIFLSIFNALLTCSSSLQSKLPPTL
EDSILNSSLSSTMPSLDNSLNSIPGTPVMTQARMEHLETSGNTAQKLQAAFLYFCRNNLR
QAQSLVDEVFPEEKSNHLLDGAVAVVSTDLLDDYPASDPRWAESVSGAASEYRGSAGSVI
LIHQLQDKQNAHSMFLKFLSEVGIWHRLTTISHGQRRNSTRWLLSEHSEKLCAANNLLQK
HSSHQGIVDAAVRKVLDARGTTATHGGLTAKDYFYREVSKIEEILEYLIEAEVKSLSNSS
LSSHERFSIILGVNAVFEAMLLSALNYRRTKTLTFEDSAAKKEFIPWTVGSGRVSVRTII
SEQHKLTIEMGIPNANDNQQRSALYQSLVVLTDLVMEGYKEQLESLSKSEDLSSRWAEVK
SQHDRHRSLLIKPLLEIGQLDKAAALAEKYEDFDILIQVCEESGGNERLMAYMKKFMDQG
FSEFLFKWYIEHKEYEKLLSCCENSPIQNQQLTKFLNSHPKLAWMHQIQSDNYTSAQETL
QHLASLEEDLCAAKKTYLSLGKLAAVFSDQPETKIKEKIEEFSQQQELVQYQETLPAVVL
ESMQTTIDTMPVYQPTKLIQLYIGDVNQNANEVDFKKAFELLRYLSDTDEEMEYDVEKWK
LIVWCRAILKDRWADIDVSMDPFESCSHTVLFKTLQLAHTSGLLGEIVPEVDELLSCDEL
KELRKSSKFEYLLRASFERIQRTLLAAS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgttcactccaagcagaaagagaactgggccatcttcaagtggaagaagatccaacata
tcattaaacacaactccccgtctcaactcatccctgaggacatcaggaacctccagagca
tctttgctacgaaaatcttttgccggaaggagtccagctgttgggagcacttctcttata
tcatcatcatccccaactgtgacttctgtattcaatgccactcaccataacattgaatct
tacccgtcctcattacctgtgctaattactgaagccattacacaagcagacgatttttct
gatatttcggcttcactgggtgaaaatggttggtccattgtagtcatcaaacagcaactg
tttgtgtgggcgcataaaccaagtgggtatgtcaagaccacagtgtgcaaagagttacgt
ctgcctgctcctgaagatgacctcatgcacacgtcgagcaacgtgtgtttggacgtggac
gaagacagtgctgcggtttcagttcttgctgttacgaacaatttccatgtgcaacactgg
ccaaacatactcacttctacaagtaattgcaatgaactgaaacacgaggcttttgtggag
aatgaaacatgcttcaatattacatcaatccagccttatggtttcttggtgacaactacc
actggtgcggtttatcagcttcagaccacaaagaaccatctgatctgtcaccagctccac
actcccaaaagtttaatgtcaggaattagtcggcgagtatcttcgtttttcttcactccc
tcacaagaatctatcaagatagtccaatcattcaccaaaccaacaaagattgttggcgag
tttgagatgcttattctaacaagcaactccctgcaacagtggaaagtatctgcaggaaat
acagagcaagccacaatgcagatggttaatgaaatggacttgcaagcagttctggcacca
aaactcaaaactaacaacagcagtagcagtgtgaaaatctggcccctagatgtcatgcgc
gcgtcacgaaaaaaacatgtaacttgcctggttggattttctcaatcagaatcaactgtg
aaatttgctttgtgtgttttcactgatctaggcaaacaagatgtagatatcgttatgatt
gagcattcaagtgtagcagaggtatctgaccctcactactacccaagttacaaattagtg
attgaggatccttcatcaaggttcatagatcacatagctatatggtgtggggagcaactt
atcctgaaaagtttaactgtagatggaagaagcaaaatggaggatacaattcctttcagc
aactctggtgataaacttgttggagccggacagtgtgatggaagatacatcttcctcagc
atcttcaatgctctgctcacttgctcttcttccctccagagcaaactccctcctactctt
gaagattcaatccttaactcttctctatcttccacaatgccatctctggataactccttg
aacagcataccgggcacaccagtgatgacccaagcaagaatggagcatttggaaaccagt
ggcaacactgctcaaaagctacaagctgcttttctctacttttgtcgaaataaccttagg
caagcacaatcattagtagacgaagtcttcccagaagagaagtcaaatcacctcctggat
ggagctgttgcagtggtgagcactgatctattagatgattatcctgcctcggatccaaga
tgggcggaatctgtatcaggtgctgcatctgaatacagaggatctgccggctctgtgatt
ctaatccaccagttgcaggacaaacaaaatgctcattctatgttcttgaaatttttatct
gaggttgggatatggcatcgcctaaccactatatcccatggacaaagacgtaactccaca
cgttggttgctgagtgaacactcagaaaaactgtgcgctgccaataacctgctgcagaaa
cattcaagtcaccaaggtattgtggacgctgctgttagaaaagtgcttgatgctagaggt
actactgccacacatggaggactcactgctaaggattatttctatcgagaagtttcaaaa
atagaagaaattcttgaatatttgattgaagccgaggtcaaatcgctgtccaattcttct
ctatcttctcatgagcgattttccatcatcttgggagttaatgcagtttttgaggcaatg
ctgttaagtgctttaaattaccgacgcacaaaaacccttacatttgaagacagtgcggct
aaaaaagaattcattccatggactgtaggatctggtagagtgagtgttagaaccatcata
tctgaacaacacaaactcacaatagaaatgggaatcccgaatgctaacgacaaccagcag
agatcagctctctatcagtccctagtggtgcttacagatctagtaatggagggttacaag
gagcagcttgaatctctctcaaagtcagaagatttatcatcaagatgggcggaagtgaaa
tctcagcatgaccggcacagatctttgcttattaaacctttacttgaaattgggcaactc
gacaaagctgctgctcttgctgaaaaatatgaggattttgatattcttattcaagtgtgt
gaggaatctggtgggaatgaaagattaatggcgtatatgaagaaattcatggaccagggg
ttttcagaattccttttcaaatggtatatagagcacaaagaatacgaaaaacttttatca
tgttgtgaaaactctccaatacaaaaccaacaactaactaagtttcttaattctcatcca
aaactagcgtggatgcaccaaatccagtcagacaattacacaagtgctcaggagacacta
cagcaccttgcatctttagaagaagacttatgtgctgccaagaaaacttaccttagcctt
ggaaaacttgctgctgtgttttcagaccaacctgaaacaaagatcaaagaaaaaattgaa
gaattttcacaacagcaagagttagtccaataccaagaaactttaccagcagtggtgcta
gagagcatgcagacaaccattgacactatgcctgtataccaacctaccaaacttatacag
ttatatattggtgatgtgaaccagaatgcaaatgaggttgatttcaagaaagcttttgaa
ctgcttagatacctcagtgatacagatgaagagatggaatatgatgttgagaaatggaaa
ctgatagtctggtgtcgagctatattaaaggacaggtgggcagacatagacgtgtcaatg
gacccatttgaatcgtgcagccatactgtattgtttaagaccttacaactcgcccatacc
tcaggtctgttgggtgagatagtacccgaagtcgatgaattactatcatgtgacgagcta
aaagaactccgtaaaagctcgaaattcgaatatttactccgtgccagctttgaacgtatt
cagcggactttgcttgccgcttcgtaa
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