Ciona intestinalis (yellow sea squirt): 100186724
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Entry
100186724 CDS
T01056
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100186724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100186724
Spliceosome [BR:
cin03041
]
Common components
Common spliceosomal components
SR proteins
100186724
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
100186724
NCBI-ProteinID:
XP_002124933
Ensembl:
ENSCING00000000257
LinkDB
All DBs
Position
8
Genome browser
AA seq
226 aa
AA seq
DB search
MSGRSGSGSTDCRIYVGNLPPDIRDKELDDLFYKYGNIRNIDLKNHRGSPFAFIDYEDYR
DADDAVRARNGYNFDGYKLKVERPRSSSGFQGRPSNYIRGRPGPPSKRTEYRVIVEGLPG
SGSWQDLKDHMREAGDVCYADVYRDGSGVVEFVNKEDMKFALKHMDDTKFRSHEGETSYI
RVKAENDRRRSTPRRSRSNSRGRRRSPTYSPRRSRSRSMSRSRSRS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggagatctggatctggttctaccgactgtcgaatttatgttgggaatctgcca
cctgatattcgagacaaagagttggacgatctgttttacaaatatggaaatattagaaat
atagatctaaaaaatcatcggggctcaccatttgcttttattgactacgaggattacaga
gatgctgatgatgcagttcgtgctcgtaatggttataattttgatggctacaaattgaaa
gttgaaagaccacgaagttcatctggattccaaggacgtccaagcaactacatcaggggt
agacctggtcctccttcaaaaagaactgagtacagggttattgttgaaggactacctgga
agtggcagctggcaagatttaaaagatcacatgagggaagctggtgatgtttgttatgct
gatgtgtacagggatggtagtggagttgttgagtttgtaaacaaggaagacatgaagttt
gccttaaaacatatggatgatacaaaatttcgatcacatgagggtgaaacttcctatatt
cgtgtgaaagcggaaaatgatcggagacgatcaacaccacgtcggtcacgttcaaacagc
agagggcgtcggcgctcaccaacttattctccaagaagatctcgttctagatcaatgtct
aggtcacgatcacggtcttga
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