Ciona intestinalis (yellow sea squirt): 100186725
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Entry
100186725 CDS
T01056
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100186725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100186725
04131 Membrane trafficking [BR:
cin04131
]
100186725
03029 Mitochondrial biogenesis [BR:
cin03029
]
100186725
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100186725
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100186725
mRNA cycle factors
P-body specific factors
100186725
Membrane trafficking [BR:
cin04131
]
Others
Actin-binding proteins
Myosins
100186725
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
100186725
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100186725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
AAA_22
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100186725
NCBI-ProteinID:
XP_026693787
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MKLADIYTKETKVWVPDDALVWRSASLVDGYKDNDDVIKIIVEAIEEEEVEEIRVLKLGH
SKDLPPLRNPDILVGENDLTSLSYLHEPAVLYNLQTRFVERNAIYTYCGIVLVAINPYSE
LSIYSNDFIQLYSGRNLGEMDPHIFAIAEEAFNQMSRDDKNQSIIVTGESGAGKTVSAKY
TMRYFATVGGSGDESTVEQKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIGFSGRYHII
GAHMRTYLLEKSRVISQGMDERNYHIFYQLCACAHLPQFKPLKLMSARDFEYTRNGDCTQ
IDGVNDESEFKETIHAFTLLGVSSKHQSLVFRLLSAILHMGNINIEENGNGHSHCSDSDE
HLITMCGLLGVEPKQMAQWLCYKKLRTMAEVLITPLTHDQALVSRDALAKHMYSKLFDWI
VRKVNAALSTTAEQHSFIGVLDIYGFETFENNSFEQFCINYANEKLQQQFCQHVFKLEQE
EYVREEIEWKFIDFYDNQPCIALIENKLGILDLLNDECRMPKGSDQSWADKLYDRHLKTS
KHFDKIKISNTSFFITHFADKVRYEIEGFLEKNKDTVQEEQLNILKASQKFELIGELFAE
ESVDRDVEVTAGVGKRGAAKVKLSHASSKPTSVRKKKETKKTVANQFQESLAQLMGILNS
TTPHYVRCIKPNDYKLSFTFEAKRAVQQLRACGVLETVRISAAGYPSRWSYTEFIARYRV
LMSTKDIVKKDPRKTCEKVLKTLIPEEDKYQPGKNKIFFRAGQVAYLEKLRANKLRACAV
IIQKNTRMWLQYKRYIRMKQSAIVVQRYVRGYQARCLVSHLRRTKAATILQTRWRGHIAR
ARYLRVLHASVVLQAYTRGMFARKIYFSMVVNAKAVVIQKHVRGWLERRTFTRTMKLMVY
LQCCVRRWLAKKQLKQLKIEARSVSHFKKLNLGMENKIMDLQRKIDVITNENRILTTKTM
KVEALQLQLVDVEKNKVLVEKYREKSDGLEHDLAHVRHLMESSSDELKLTKESFERERED
KDKLITELHAEVLRLKTRNSEVLSQSAMKENEIRESFKSEVKVRLNELQVALDDERAQHQ
ARIKDYNRIEQRYENIKDELEVTRAREGEHGSSNGTLEHSELLDQIEELNQEKNELELRI
AEKLKGEFEYESQIKLRQAMEENETFKNEISKLRKSIAETAAESMGEDSNVFKAMYEQME
AMQEELEVRRSEVIQLKSFVAKQPVVSETKTCSTMTGSELLGSRNRMEDINLDKLDKSDL
KAVLIKVYDHNRMLESELEAERKNHEIEILDLRSASTQNGGYDVTMEGNIQQELSRLSSE
NYNLLTKVESLDKMNKKLKRQLKLYSRKLNDGSTRSSLVSSDSTLSVPSRPSEEDTGSIQ
GHPMLRHKESTDGSLGMLQYKAGDESKVIQTIILDFKPRGVAVNMIPGLPAYLLFKLLRF
ADYSNDDKMIKQLLQQIINGIKRVEKKHDKEFEFMSFWLSNTCRFLHNMKQYSGEEEYMK
ESTEHQRRHCLRNFDLAEYRPVFSDIAISLFQKLVLNMVRSIKQMIVPAMLEHDTIQGLS
SKPAGMRGRSASKDGIDYTVEALIKQLSSFHSMMVKTLLSLDGMDRHGRLV
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggctgatatttacaccaaggagacaaaggtgtgggtgcccgatgatgcgttg
gtgtggcggtctgcctcattggtggatgggtacaaagacaatgatgatgtcataaagatt
attgttgaggcgattgaagaggaagaagtggaggaaattcgtgttttaaagctcggacat
tcgaaggatttgcccccgttgcgcaaccccgatattttggtcggagaaaatgacctgaca
tcactgagttatttgcatgaaccagctgtgctgtataacttacaaacaagatttgtggaa
agaaacgcaatatatacatattgtggaatcgtattagttgctattaacccctacagcgag
ctatcaatttattcaaatgatttcattcaactttactctggccgcaacttgggggaaatg
gacccccatattttcgccatcgctgaggaagcttttaatcaaatgtcgagggatgataag
aatcagtcgatcattgtaaccggggagtctggggcaggaaagacggtatcagcaaaatat
acaatgagatattttgcgacggttggggggtcaggtgatgaatcgaccgtggagcaaaaa
gttcttgcttcgaacccaattatggaggcgattggaaatgctaagacaactcgcaacgac
aacagcagtcgctttggtaaatatattcagatcgggttcagcggtcgttaccacatcata
ggagctcacatgcgaacatacttgctggagaaatcgagggttatatcacagggtatggat
gaaaggaactaccatatattttatcaactttgtgcgtgcgcccatcttccacagttcaaa
ccattaaaactaatgtcggctcgtgacttcgaatacaccaggaacggagattgtacacag
atcgatggcgtcaacgacgaaagtgaattcaaagaaacgattcatgcgttcactttactt
ggtgtcagtagtaagcaccagtcgttagtttttcgattgttgtctgccatacttcatatg
gggaatataaacattgaagagaatggaaacggacactcccattgttctgacagcgacgaa
catttgattacaatgtgcgggttgctgggagttgaaccaaaacaaatggcccagtggctg
tgttataaaaagttgaggacgatggctgaggttcttattaccccgctgactcatgatcag
gcattggtatccagagatgcgctggccaaacatatgtattccaaactatttgattggatc
gttcgtaaagttaacgcagctttatcaacgacagctgaacaacattcattcatcggggtt
ctggacatttacgggttcgaaacatttgaaaacaacagttttgaacaattttgcataaat
tatgccaacgagaaattacaacaacagttttgccagcacgtgtttaaacttgagcaagaa
gaatacgttagggaggagatagaatggaagttcatcgatttctatgacaaccagccgtgt
atcgcgctgatcgaaaacaaacttgggatattagatcttttgaacgacgagtgcagaatg
cctaaaggtagcgaccaatcttgggctgataaactttatgatcgtcacttaaaaacatcc
aagcattttgacaaaattaagatctcaaacacttctttctttatcacacactttgctgac
aaagtcagatacgaaattgagggatttctggaaaaaaataaagacaccgtgcaagaggag
caactgaatatattgaaagcgagccagaagtttgagttgattggggagttgtttgctgag
gaatcagtcgaccgtgacgttgaagtgacggcaggggtaggcaaacgaggcgcagcgaaa
gttaaactgtcgcacgcttcgtctaaaccgaccagcgtacgtaaaaaaaaagaaacgaag
aagacggtggctaaccagtttcaagaatcgttggcgcaactcatggggattttgaactca
acgactccccattacgtccgatgcatcaaaccaaatgattataaactaagtttcactttc
gaagcaaaacgcgcggttcaacagcttcgtgcgtgcggggtgttggagacggtcaggata
agcgcggctggttacccgtctcgttggtcgtatacagagtttattgcaagatatcgtgtg
ttgatgtcaacaaaggacattgttaaaaaagatcctcgtaaaacttgtgagaaagttttg
aaaaccctcatcccagaggaggataagtatcaacctggaaaaaataaaatctttttccgt
gcaggccaggtcgcttatttggaaaagttgcgcgccaacaaactacgagcttgtgcggtt
attattcaaaagaatacacgaatgtggttgcaatacaagcgttatattaggatgaaacaa
tcggccattgttgtccagcgatacgttcggggctaccaagcaagatgtttggtatcacat
cttcgacgaacaaaagctgcaacaatccttcaaacaagatggcggggtcatatcgctcgt
gcccgatatttacgagtgcttcatgcctcagtggtgttgcaagcgtataccagaggaatg
ttcgcacgaaagatttatttttcaatggtggtgaatgcaaaggcagtagttatacagaaa
catgtgcgtggttggttggagagacgtacatttactcgcacgatgaagttgatggtttac
cttcaatgctgtgtacgaaggtggttggctaagaagcaactgaagcagctcaagattgaa
gcaagatcggtgagccatttcaagaagctaaaccttggaatggagaacaagataatggat
ttgcaacgaaaaattgatgtcattacgaatgaaaaccgaatccttacgactaaaacgatg
aaagtggaagctcttcagctccaacttgtggatgttgaaaaaaataaagttttggtcgaa
aagtaccgagaaaaaagcgatgggctggaacatgatcttgctcatgtgcgccacctaatg
gaaagttcgagcgatgagttaaagttaacgaaagaatcgttcgagcgtgaaagagaggac
aaagataaattaataactgagctgcatgctgaggttctccgattaaaaactcggaactcg
gaagttttgtcgcaatctgccatgaaggaaaacgaaataagagaatcatttaaatctgaa
gtgaaagttcgattaaacgaactccaggtggcgctagatgatgaacgagcgcaacatcag
gcgaggataaaggattataatcgcatcgaacaaagatacgagaacattaaggatgaattg
gaagttacccgagctagggaaggcgaacatggaagctctaatgggacactagagcacagt
gagcttttggatcagatcgaagaattaaatcaggagaaaaatgaattggaattgaggatc
gccgagaagttgaagggggagttcgagtatgagagtcagataaagttacggcaagcaatg
gaagaaaacgagacatttaaaaacgagatttcgaaattacggaaatcgatcgctgaaaca
gcagcggaaagtatgggagaagatagcaacgtatttaaggcaatgtacgaacagatggaa
gcgatgcaggaggaacttgaagttcgtcgatccgaggttattcaactaaagtcgttcgtt
gctaagcaacctgtggtatcagagacaaagacgtgttcaacgatgacgggttctgaacta
ttgggttcgaggaatcggatggaagacattaatctcgataaacttgataaaagtgattta
aaggcagttcttattaaagtgtatgaccataatagaatgttggaatcagagctcgaagcc
gaaagaaaaaaccatgaaattgaaattttggatttgcgttctgcctcaacacagaatggt
ggatatgatgtcacaatggagggaaacattcagcaagaattgtcgcgtttatcgtcggaa
aattataatttgctgacgaaagtggaatctttggataaaatgaacaaaaagttgaaacgg
cagctcaagctgtacagtcgcaaacttaatgacggttcaacgagatctagcttggttagt
tctgattcgacccttagcgtgccatctcgccccagtgaagaagatacgggttcaatccaa
ggtcacccaatgttgcgtcataaagaatcaacagacggatcattagggatgctacaatac
aaagctggggatgaaagcaaagttattcaaaccattatattggatttcaagcctcgtggg
gttgctgtgaacatgatacctggacttccagcttatttacttttcaagttgctacggttc
gcagattacagcaatgatgataaaatgattaaacaactcttgcaacaaattatcaacggg
ataaaaagagtggaaaaaaaacacgataaggaatttgagttcatgtcgttctggttgtcg
aacacctgcaggttcctacataacatgaaacagtacagcggggaagaagaatatatgaaa
gaatcaacagaacatcagagacgacattgtttacgcaactttgaccttgctgaatatcgg
cctgtgtttagtgatattgcgatctcattgttccaaaagttggtattaaacatggttcga
tctatcaaacagatgattgttcctgctatgttggaacatgatacaatacaaggtctgtcg
agcaaaccggcgggcatgaggggtaggagcgccagcaaagacggcattgattacacagtg
gaggctttgattaaacaactgtcgtcatttcattcgatgatggtaaaaacattattgtcc
ttggatggaatggatcgccatggaagattggtttga
DBGET
integrated database retrieval system
