Ciona intestinalis (yellow sea squirt): 100186727
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Entry
100186727 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100186727 isoform X2
KO
K14341
solute carrier family 10 (sodium/bile acid cotransporter), member 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03272
Virion - Hepatitis viruses
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100186727
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100186727
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
100186727
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBF
HemY_N
SARAF
REV
UPF0542
Motif
Other DBs
NCBI-GeneID:
100186727
NCBI-ProteinID:
XP_002124965
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All DBs
Position
13
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AA seq
995 aa
AA seq
DB search
MKFVKYLFLLLVLLLVSSLLLESAGVGSKEERRERRRRRRKNKNKKKNRTTTVGLVTTDS
EIKAIENITMPTIIQQSSAEKKSSSKTILEISTTYPVAMVTVADLSPQTNGDGMSSIIDM
LFGYDYDSSYSEYDDETTANETSQTTIVTEETSAVMTNVGIDPRTISSTHSLQIEEEITE
EKMTLSHKRMSSKPADVITSDVMLGCDDDKYSLLVKLKMQLHVANGEISFLDAAVIKVGE
YTEEQKLEKVKALLAENGLAPLPDCIPPTKEVHVGKEPISKEDVNLSTSTKKNDVMMTQS
KVVTSSTKTTTVDAMPQLVKDMTLRNENMTSSSEDAATSESENEEINKNNVTNAMGDVTM
TSLSKPQCQSRMNASNLEEVLTTSRRMEEAGMLPPGVSQRTAAGEMTVMELLKMMRDAAI
KAGRIPEECMEDQQSGRMPEPEGSYGQKKKREQLKMLQGYIQAGYLPPDTIEKLLRGDIT
PEWLRANITNNREIILSRMPEVLRTLIEDGKMPEDIETAIFSGKYNSTEIAMMIIADDDL
IKAMLPTDFRNMIQDRPIPMKMKLLLISGKNSSEIKEEILSDDDLLKEVMVPSSYFFFNL
FKVQRNRTINVVISVLVVVVLAFVMVSLGCTMTVSKIMEHARKPKGVIIALVAQFCIMPA
SAYGLTQAFQLDTYAAIAVLICGCCPGGNLSNMLAYSLNGDMDLSILMTTCSSVIGLGMM
PLSIYLYSKLITPLSADIVPFDKIIINILLTIFPVIVGIIIRHYRPQWTTIIMRIGGLVL
LLCSITVAVLAGIMLGDAFFVYFPVPVLACCAILPMSGYILGYFFAFLFRENPKCRRTIC
VETGCQNVQLCGTVLKLAFDPIIVGVLFLLPLVYMAFQVMEAFLIIMIFRVYNRCRGGKE
KGEEKSGSEEKEEKRKQPDMELENGTKIEAKDASPLLNKSTTSNIDDMPPPPDQFKPVKT
DQDQDSDIETLWPLKGEPTPAYLDSFKKAGTENFV
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtaaaatatctcttcctcctgctggttctccttcttgtttcttctttgctc
ctggagagcgcaggagtgggaagcaaagaagagagaagggagagacgaagaaggcgacga
aaaaacaaaaacaagaagaaaaacagaacaacaacagtcggactcgtaacaacggattct
gaaattaaagcgattgaaaacataacaatgcccactattattcaacaaagctcagcagaa
aaaaaatcttcttcgaaaacgattttggaaatttcgaccacgtaccctgttgctatggta
accgtggcggatctttcgccacaaaccaatggtgacgggatgtcaagtataattgacatg
cttttcgggtatgattacgactcctcttattctgaatacgatgacgaaacaacagctaac
gaaacgtcacagacgaccattgtgacagaagaaacctctgctgtcatgaccaacgttgga
atcgatcccagaacaattagttcgacacactcacttcaaatcgaagaagaaatcaccgaa
gaaaagatgactttatcccacaagcgtatgtcatcaaagcctgctgacgtcatcacttct
gacgtcatgctaggttgcgatgacgataaatacagcttgcttgttaaactgaagatgcag
cttcacgttgctaacggagagatttcgttcttggatgctgctgttattaaggtcggggaa
tacacggaagaacagaagttggaaaaagtaaaagccctccttgcggaaaacggacttgcg
ccgcttccggattgcattccgccaacgaaagaagttcatgttggcaaagaaccgatttcc
aaagaggacgtcaatttatcgacgtctacgaaaaagaatgacgtcatgatgacgcaatca
aaggtggtgacgtcgtcgacgaaaacaacgacagttgacgcgatgccacaattggtcaaa
gatatgacgttaagaaatgagaatatgacgtcatcatctgaagatgcagctacgtcagaa
tcggaaaatgaagaaataaataaaaacaatgtcaccaacgcgatgggtgacgtcactatg
acgtcactttcgaagccgcagtgtcagtcgcggatgaacgcaagtaacttggaggaagtt
ctcactacttctcggaggatggaagaagcggggatgttgcctcccggagtgtctcaaagg
acagcagctggcgagatgacggtcatggagctgctcaagatgatgagggatgctgcgatc
aaggctgggaggatcccggaagaatgcatggaggatcagcaatcgggaaggatgccggag
ccggaggggtcatacggtcaaaagaagaaacgagagcaactgaagatgttgcaaggttac
attcaagctggttacctacctccggacacgatcgaaaagctcctccgaggagacattact
ccggagtggctccgagccaacatcaccaacaacagggagatcatcttatcccggatgcca
gaagtcctccggactctaattgaagacgggaagatgccagaagatattgagaccgcaatc
tttagtggaaaatataactccacagagatagctatgatgataatagcagacgatgatctc
ataaaggcgatgctgcccaccgatttccgaaatatgatccaggatcgaccgatcccgatg
aagatgaaactgcttctcatcagcgggaagaattcctccgagatcaaagaagaaatcctc
tcagatgacgatcttcttaaagaagtgatggtcccgtcatcttacttcttcttcaacctc
ttcaaagttcaaaggaacagaacaatcaatgtcgtcatcagcgtactcgttgtcgtggtt
cttgctttcgtcatggtctctttaggatgcacgatgactgtatcaaagattatggaacac
gcgagaaaaccaaaaggtgtaataatagcacttgttgcacaattctgtatcatgcccgct
tctgcttacgggctcacacaagcctttcaactggatacatacgcagctattgctgtgtta
atatgcggatgctgtcctggtgggaacttgtcaaacatgttggcgtattcacttaacggt
gatatggacttaagtattctcatgacgacgtgttcctctgttatcgggttgggcatgatg
ccgttatcaatctacttatactcaaagcttataacgccgctaagcgctgacatcgttccc
ttcgacaaaattatcatcaatattttgctgacgatctttccagtaattgtcggtatcatt
atcagacattacagaccgcaatggacgacaattattatgaggatcggtgggctagttctt
ctgttgtgttcgatcaccgtcgctgtgttggctggcatcatgcttggtgatgccttcttt
gtgtattttcctgtgcctgtccttgcctgctgcgccatattacccatgtccggttacatt
ctgggatatttcttcgctttcctgttcagagaaaatccaaaatgcagacgaacgatctgc
gttgagactggctgtcaaaacgtccagttgtgcggaactgttctaaaacttgcatttgat
ccaattatagtcggggttcttttccttttaccgctggtttatatggctttccaggttatg
gaggcatttctcattatcatgatattccgtgtctacaaccgatgccgaggaggaaaagag
aaaggagaggagaagagtgggagcgaagagaaagaagagaaaaggaaacaaccggatatg
gaactagaaaacgggacaaaaatcgaagctaaagacgcctctccattactgaacaaaagt
acaacgagtaatatagatgatatgccgcctccgcccgaccagttcaaaccagttaaaacc
gaccaagaccaggacagcgacatcgaaactttgtggccgttaaagggcgagccaacgccg
gcttacttggattcgttcaaaaaagccggaaccgaaaactttgtttaa
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