Ciona intestinalis (yellow sea squirt): 100186746
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Entry
100186746 CDS
T01056
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04136
Autophagy - other
cin04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100186746
04136 Autophagy - other
100186746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100186746
04121 Ubiquitin system [BR:
cin04121
]
100186746
03029 Mitochondrial biogenesis [BR:
cin03029
]
100186746
Membrane trafficking [BR:
cin04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100186746
Ubiquitin system [BR:
cin04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
100186746
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100186746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
DUF3340
UvrB
Motif
Other DBs
NCBI-GeneID:
100186746
NCBI-ProteinID:
XP_002127433
Ensembl:
ENSCING00000003459
UniProt:
A0A1W2WF05
LinkDB
All DBs
Position
1:complement(3748200..3754510)
Genome browser
AA seq
311 aa
AA seq
DB search
MQNVFNSVKSSALGVAELLTPVLKESKFKETGVLTPEEFVIAGDFLVHHCPTWQWLAGDK
TKTKAYLPQDKQYLMTRNVPCHKRCKQMEYNEEHEAIIDDIGDGGWVDTHHNVEVDKAQE
EIKEMTLNKEKTNNVNLNEDDGDDDDDDDDEEALDMENYAEMLESEDKATVDLVAVKKAN
TSSTTNEDGGIIQTRTYDLHITYDKYYQTPRLWLSGYNEDRKPLSMVEMYEDISQDHVNK
TVTIEPHPHLPPPNMCSVHPCKHADVMKKIMQTVEDGGGKLEVHMYLLVFLKFVQAVIPT
IEYDYTRHFSL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacgtatttaactctgttaaaagcagtgcattgggagttgcggagttgctcaca
cctgttctaaaggagtcaaagttcaaagaaactggtgtcctcacaccagaagaatttgtt
attgctggtgattttttggtccaccactgtccaacatggcagtggttggctggggataaa
acgaaaacaaaagcttatctacctcaagataaacaatatcttatgaccagaaatgttcct
tgccacaagcgatgcaaacaaatggaatataatgaagagcatgaagcgatcattgatgat
attggtgatgggggttgggtggacacgcatcataatgttgaggttgataaagctcaagaa
gaaattaaagaaatgactttgaataaagagaaaacaaacaatgtgaatctgaatgaagat
gacggagatgatgacgacgacgatgatgatgaagaagctcttgacatggaaaattacgcg
gaaatgttggaatctgaggataaggccacagttgatcttgtagctgtgaaaaaggcgaat
acatcatctaccactaacgaggatggtggtatcattcaaactagaacatatgatcttcat
attacttacgataaatattatcaaactccaaggctatggttatcaggttataatgaggat
agaaaaccattatcaatggtggagatgtacgaagatatcagtcaagatcatgtgaataaa
actgttactattgaacctcatccccaccttccacctcctaacatgtgctctgttcatcca
tgcaaacatgccgatgtgatgaaaaagataatgcagacggttgaggatggtggagggaag
ctagaagttcacatgtatttgttggtgttcctcaaatttgtacaagcagttattccaacc
attgaatatgattatacaagacatttttcgttgtga
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