Ciona intestinalis (yellow sea squirt): 100186747
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Entry
100186747 CDS
T01056
Name
(RefSeq) autophagy-related protein 13-like
KO
K08331
autophagy-related protein 13
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04136
Autophagy - other
cin04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100186747
04136 Autophagy - other
100186747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100186747
03029 Mitochondrial biogenesis [BR:
cin03029
]
100186747
Membrane trafficking [BR:
cin04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100186747
Atg1 complex
100186747
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100186747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100186747
NCBI-ProteinID:
XP_002123340
LinkDB
All DBs
Position
1:complement(2173416..2179467)
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AA seq
613 aa
AA seq
DB search
MSSSNLSTQDKRDLDKFIKFLSLKSTQIIVQSRLGRKVSTKSVASPTGAEWFNLAVKDYP
EIQKEAKAALNNGNPSVEQSLVVEISLRTSDADLLVLEVWSLSVTNRLEDVRVHHTIYNR
MSLLLKSLLCVTRLTPAYKLSRNQGSEYVICYRVYMGQISQTGLGEGFQTLRVGSLGTPL
GTITMSAAYRTNQNLHVSTKGLTPKIESVMPVKNDYFGNTARPHISSPARPCYTLKSRIR
TMSETSETAIPSVESPPSCHLFNTSFSTSPVDYKHKGEHILDRSEQQATFTVGTPPRLTR
ASTSSPILVHRNKLYHPQNSPQSPPENRHQSFIKSKSRDPTIQKYGSSAPLMQVFYKHHT
PPQPSVTAALEPQPPFQCSPDRQEKTAVHCYSTSQPTKYCHWTNSNVRTITAHNIPPSKG
GEFSTDLQTTTHISPPHPQLVTGAFVSGKTAARAKAAIAEAEAKHLAFRDLLRTTPTDCP
SEDNASQLSSSPESLAKEIIGKESKSLNSVPRRYSSSSSLSSKQSTDGSVAAKQNSDDYV
MVDLNPAFARNDSSIDLGTFYRECENVPELIMFNEQHGTETNETLLDLTKQLEDYEQEMT
DFDAFLQEINAAV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcaaacctctctacacaagacaagagagatcttgacaaattcattaaattt
ttgagcttgaaaagcactcagattatcgtacaaagccgcttgggaagaaaagttagcaca
aaatctgttgcctcgccaactggggctgaatggttcaaccttgctgtgaaagattaccca
gagatacagaaagaggcaaaagctgctttgaataatggcaacccatctgtggagcaaagt
ttggtggttgaaatatcactaagaacaagcgatgctgatttgctagtgctggaagtgtgg
tctcttagtgttacaaacagattagaagatgttcgtgttcaccacacaatctacaaccga
atgtcattacttttgaaatccctcctatgtgttacgaggcttacaccagcttataagtta
tcacggaaccaaggaagtgaatacgttatctgctacagagtctacatgggccagataagc
cagactgggcttggtgaaggattccaaacccttagagttggttcacttggtacacccctt
ggtaccataactatgtcagctgcatatagaaccaaccaaaatttacatgtctctactaaa
ggactaaccccaaagatagagtcagtgatgccagtcaaaaacgattacttcggcaacact
gcacgaccccacatctcctctcctgcacggccgtgttacacactcaagtcaaggataaga
acaatgagtgaaacatccgaaacagcaataccaagtgtggagtctccaccatcgtgtcat
ttgttcaatacatcattttcaacttcgcctgtggattataaacataaaggcgaacatata
ttagacaggagtgaacagcaagccacgtttacagttggcacaccacctcgcctgacacgt
gcctccacatctagtcctatccttgtgcataggaacaaattataccatccacagaacagc
ccacagtcaccaccggaaaaccgccaccaatcgtttataaaatctaaatcaagagaccct
accatacaaaaatatggttcctcagccccactgatgcaggttttttacaaacatcataca
ccaccccaacccagtgtcactgcagcgttagaaccccaaccccccttccaatgctcacca
gataggcaggaaaagactgccgtacattgctactccacctctcaacctaccaaatactgc
cattggactaactccaatgtacggacaataacagcgcacaatatacccccctcgaaaggt
ggggagttcagtacagatcttcaaacaaccacccatatttccccaccacacccacaacta
gtaacgggggcgtttgtatccggcaaaacagcagcaagagccaaagcagcaattgcagaa
gcagaggcaaagcaccttgctttccgagatttactccgcactacacctaccgattgccca
tctgaagacaatgcttcacaattgagtagttcacctgaaagtttggcaaaagaaatcatt
ggaaaagagagcaagagtttgaattctgttccacgaagatatagcagtagtagcagcctt
tcttctaagcagagcactgatggttctgttgctgccaaacaaaattcagacgactatgtt
atggtggacttgaatccagcgtttgcacgaaatgattcctcaattgaccttggtacattt
tatcgcgaatgtgaaaacgttcctgagcttataatgtttaatgaacagcatggtactgaa
actaatgaaacactgttggatttaacaaaacagcttgaagactatgagcaggagatgaca
gactttgatgcgtttctgcaagaaataaatgctgctgtttag
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