Ciona intestinalis (yellow sea squirt): 100186753
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Entry
100186753 CDS
T01056
Name
(RefSeq) target of EGR1 protein 1
KO
K13202
target of EGR1 protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100186753
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100186753
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Gene cluster
GFIT
Motif
Pfam:
CAF1
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
100186753
NCBI-ProteinID:
XP_002129875
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Position
5:877098..878979
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AA seq
446 aa
AA seq
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MEVQVIEVTKGNLEPLWSKIVKDVKNSIFIALDTEMSGLGPQAQLMKSDLEQRYQGISAA
ASSRSIISLGLACFEPYSGKEPLAYNVTVYNIIVLCSDPFTIDPGAVSFLVNHGFNFNKQ
FCNGISYYKGNDRPKEKDKLTMRSLFAEIIKLRKPLVLHNGLVDLVFLYNSLYAELPGTL
NSFMADVCEIFPAGIYDCKYIAEFCDRLTASFLLYAFKKTQWKNEALAAAGKICLKVHFK
MESEWTVTVPLNVGGNKAISHKNIKGVEICEKYAAYGWCRNGILCKKVHDIDTIVQFHKT
SKQKRKRKRTKSSSDTKDVQTLMEQDEIKPTEENANPIKRAVFDNSTNTQGHRSSLDAFM
TGYIFATFIASQYTPTPLNENSTTEKENDKKEKFTSEIQYLSRENKTKIVNKLYLSGKPI
PLQVTKSKYSKTSKNHNEKLLKVYLS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggtacaagttatagaagtaacgaaaggaaatcttgagccattatggagtaaaatc
gtgaaagatgtgaaaaactccatttttattgcactagatacagaaatgagcggattagga
ccccaagcccagctaatgaagtctgacttggagcaaaggtatcaaggaatttctgcagca
gcgtcttcccgttctattatctctcttggacttgcttgttttgagccatattctggaaaa
gaaccgctggcctataatgtaactgtgtacaatattatcgtattatgttctgacccattc
accatcgaccctggtgcagtaagtttccttgttaaccatggctttaattttaacaaacag
ttctgtaacggcatcagttattacaaaggcaatgatcggccgaaagagaaagacaaactt
acaatgcgatctttgtttgcggaaattattaaactaagaaaaccgcttgtgttgcacaat
gggcttgtggacttggtgtttttgtacaactcactctatgcagagttgccagggacctta
aactcattcatggcagatgtgtgcgagattttccctgctggtatatacgactgcaaatat
atagcagagttttgtgatcgtttaacagcatcctttctgctttatgcgttcaaaaaaacc
cagtggaaaaatgaggcactagcggctgctggaaaaatttgtttaaaagttcactttaaa
atggaaagtgagtggaccgttactgtgccactaaatgtgggtggtaataaggcaattagt
cacaaaaatatcaaaggagttgaaatatgtgagaaatatgctgcatatggttggtgtagg
aatggaattttgtgtaaaaaggtacacgatattgacactattgtacagtttcacaagact
agtaagcaaaaacgtaaacgtaaacgaacaaaaagcagttcagataccaaagacgtgcaa
acacttatggaacaagatgaaattaaaccaactgaagaaaatgcaaaccccattaaaagg
gctgtctttgacaattcaaccaacacacagggtcataggtctagtttggatgcttttatg
acaggatacatttttgccacctttatagcttcacaatatacaccaacaccccttaatgaa
aactcaactacagaaaaggaaaacgataaaaaagaaaaattcacatcagaaattcaatat
ttgtcaagggaaaacaagaccaaaattgtcaacaagttgtatttaagtggtaaaccaata
ccgttgcaagttacaaagagcaagtattcaaaaacttcaaaaaatcacaatgaaaagcta
ttgaaagtatatttgtcatga
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