Ciona intestinalis (yellow sea squirt): 100186831
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Entry
100186831 CDS
T01056
Name
(RefSeq) hyaluronidase-1-like
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00531
Glycosaminoglycan degradation
cin01100
Metabolic pathways
cin04142
Lysosome
Module
cin_M00076
Dermatan sulfate degradation
cin_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
100186831
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100186831
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
cin02042
]
100186831
00536 Glycosaminoglycan binding proteins [BR:
cin00536
]
100186831
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cin00537
]
100186831
Enzymes [BR:
cin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
100186831
Bacterial toxins [BR:
cin02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
100186831
Glycosaminoglycan binding proteins [BR:
cin00536
]
Heparan sulfate / Heparin
Enzymes
100186831
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cin00537
]
Enzymes
100186831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
100186831
NCBI-ProteinID:
XP_002128103
LinkDB
All DBs
Position
5:complement(1615891..1617954)
Genome browser
AA seq
432 aa
AA seq
DB search
MSFSYVFLALGILGSVCHSQSLQSYLTTSLKDNIWQPPLPDRPFIGVWNVDSNRCLTKYN
VPIDLSSFDIIHNPNEEYVGNQMVIFYAALLGLYPKYGTDGLAVNGGIPQNGNISAHYEK
CVDDIMARIPDSNYNGIAVIDWEAWRPKWERNGWGSGLIYQNKSIEKVKKEHPSWPLNKV
KAQAKIEFEEAAKSYMLGTLNLARLMRPKAHWGLYLFPDCYNYDKTGKRMTCTTKTINMN
NDIQWLFDASNALYPSTYLGLWFKNTNASMEYVANRVKEALRVDFDRKNDISAPVYVYNN
IFYRKSSEFLTQKDIIHSSGTAAVLGASGVVFWGDSICSKTKEMCENLKYYVENILGPYI
KSASDSAAMCSLNTCNGHGRCVVSIKQRKYPQSKVDVSFLKFISNAIPSNIEYFVSCQCY
SGFTGTYCQSLI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttcttatgtttttcttgctctaggcatattgggttcagtatgtcattcccaa
tcattgcaatcatatttaactacatctcttaaagacaacatatggcaaccacctttacca
gacagaccgtttattggtgtatggaatgtagattctaatcgttgtcttacaaaatataac
gtgcccattgatttatcctcatttgacataatacataatcccaatgaagaatatgtggga
aaccaaatggtgatattttatgccgcgttgcttggtttgtatccaaagtatggtacagat
ggactggcagttaatgggggaattccccaaaacgggaacatttccgcacattacgagaaa
tgtgttgatgatataatggcaaggattcctgattcgaattacaacggaatagccgtaata
gactgggaagcatggagaccaaaatgggagcgtaatggttggggaagtgggcttatttat
caaaacaaatctattgaaaaagtgaaaaaagaacatccaagttggccactgaataaagta
aaagctcaagcaaaaattgagttcgaggaagcagcaaaaagttacatgcttggtactttg
aatttagcaaggttgatgagaccaaaagcacactgggggttgtacctttttccagactgc
tacaattacgataaaactggtaaacgtatgacttgcaccacgaaaactataaacatgaac
aatgatattcaatggctgtttgatgcaagtaatgctctttacccttctacctacctgggg
ctttggtttaaaaatacaaatgcttctatggagtatgttgccaacagggtaaaggaagct
ttacgtgtggattttgatcgtaaaaacgacataagcgctccagtttatgtttacaataat
atattctatcgtaaaagttcagagtttttaacacagaaagacataattcattcctctggc
actgctgctgtgttaggtgcatcaggtgttgtgttttggggagattcgatctgtagtaaa
accaaagaaatgtgcgagaacctaaaatactatgtagaaaacatactgggtccttatata
aagtcagcgtcagatagtgctgccatgtgtagtttaaatacatgtaatggccatggtaga
tgtgttgtgtcaattaaacaaagaaaatatccccagtcaaaagttgacgtctcgtttctt
aaatttataagcaatgctattccttctaatattgaatattttgtatcttgtcagtgttac
agtggctttactggaacttattgccaatctctgatataa
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