Ciona intestinalis (yellow sea squirt): 100186863
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Entry
100186863 CDS
T01056
Name
(RefSeq) PDZ domain-containing protein GIPC1
KO
K20056
PDZ domain-containing protein GIPC
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100186863
Membrane trafficking [BR:
cin04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
100186863
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIPC1_GH1
GIPC1_GH2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
100186863
NCBI-ProteinID:
XP_002123731
Ensembl:
ENSCING00000009648
UniProt:
F6XH93
LinkDB
All DBs
Position
5:complement(619476..624510)
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AA seq
316 aa
AA seq
DB search
MPFSSLFRKKKDKVVATKPQPPPAPAVTASLEDNAVKQKLVFNAQLAQGSPTASIEGFSN
VKELYKKLSEAFNIPVSEIIFCTLNTHKCDMERLLGAQIGLDDFIFVHTKGEKKVLTLTK
SEAALGLTITDNGAGYPFVKRIRAGSVVEKYETVCVGDHIESIDNVSTVGTRHFQVAKQL
KDIPLNTTFLLTLVEPKKGFDMIAQRGAGKAAPSSNNLGTGKSTVRLRSKGPATLEEAPS
EDDGKAVARIEDLLESFMGIRDADLSSTIWECGKSKNNPDEFVSSLNDQLGEFGFPQEFI
FDVWGVVLDMRSKNTF
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcagcagtctctttcgtaaaaagaaagacaaagtggtggcaaccaaacctcaa
ccaccaccagcaccagctgtaacagcttctcttgaagataatgctgtgaaacaaaaactg
gttttcaatgcacagcttgctcaaggaagcccaacagcaagtattgaaggtttttcaaac
gttaaagaactttacaagaaactttctgaagcttttaatattcctgtttcagagataatc
ttctgtacattgaacactcacaagtgtgatatggagagattgcttggggcacaaatcggt
ttggatgatttcatatttgtgcacaccaaaggtgaaaagaaagttttaaccctaaccaag
tctgaagcagctcttgggttgacaattaccgataatggagctggttatccatttgtcaaa
cgaattcgggctggttcagttgttgagaaatatgaaacagtttgtgttggtgatcatatt
gaatcaatagacaatgtgtctactgttggaacaagacatttccaggtagctaaacaactc
aaggacattccactcaacacaacatttcttctcacactggtggaacctaagaaaggattt
gacatgattgcgcaacgtggggcaggtaaggcagctccaagcagtaacaaccttgggaca
ggcaagtcaactgtacgtctacggtctaaaggtcctgccacattggaagaagctccttcg
gaagatgatggcaaagctgttgcgaggatcgaagatttattagaaagtttcatgggaata
cgggatgctgatttatcaagtacaatatgggaatgtgggaagagcaaaaacaatccagat
gagtttgtttcttctttgaatgatcagcttggggaatttggattcccgcaagaatttatc
ttcgatgtgtggggcgtggtgctggatatgaggtcgaaaaacacattttaa
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