Ciona intestinalis (yellow sea squirt): 100186873
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Entry
100186873 CDS
T01056
Name
(RefSeq) rapamycin-insensitive companion of mTOR isoform X1
KO
K08267
rapamycin-insensitive companion of mTOR
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100186873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100186873
Membrane trafficking [BR:
cin04131
]
Autophagy
Other autophagy associated proteins
mTORC2 complex
100186873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RICTOR_N
RasGEF_N_2
RICTOR_M
RICTOR_V
Motif
Other DBs
NCBI-GeneID:
100186873
NCBI-ProteinID:
XP_026694307
LinkDB
All DBs
Position
Unknown
AA seq
1623 aa
AA seq
DB search
MSSLAVIPASSKRVKSLRIRTGRSGSGRFEHNDDTIPIDLSRDPNEILKEILINVSAKQR
VSTERKLGHLNNLVKLFCSVPDDDVITIPMEVIMTCLKPTLVSEVKEVRAAGVRAYRYLI
NDEPSKRIFMDLKLDYLITKCLDISHFNEVERIQAIRLVRKIAHIKQRTNETIIPLSLAS
CIVSVSLGGAEERDRVYRTCLAVLCELALLQPWLVVRCNGILALINAVLECHMYQRINEC
LCMSLMHIINHPCIREWHPTILDVGPTLAPYTELNYRFHADVEDTKLKDELEMRFAASKM
AIVSLLRTWDGLFHIVKSRDMIGSLVNAIRIPYNNIRRGIFAVLCDLFYFNEPTWTEDFE
TALKAAAPGSFRDNWRHSEGFVVAETKSLLPVHSSSRPDLVNSHLAILLSSFVQSGLLQA
LSSVAVSSDAQSAISSTILLGSLLHLNSRLLPHKDVSTNQWLLPDLLKNTGTNLEENLRI
NLAVKRLGEVHAMLTSPPNTYSLYLNQLQYNVKQTKREPSSQPRSRTSSGTSLDTTPTSF
SLIRRNRSLNIIRDHSEELTLLALKNTKVLTTKEKEDWDWGSLCSLLLSPPSIIFLQNLG
VDETVRRFFRRLIYFYLPSSKLFSAIDLAQDGGHDHNRIYVVTACHMVQFLSNSDQEGQR
LLRNLVEDILAFLPKTNTETGGYSRSNGSLGVTCARDYYLILGSLSGHRHGDNILQQCKV
YKYYLDLASETTHESLIKLMISGLRYNQNNNARAVLSKVLKTCNEASRLYATGFLRVLLR
TNCPGFHHWGSELLTTQLFDRSNEVTAEAIDILHEACYDKQYLRAVVRLRPTLLHLGDRG
SLLVCRFISDPKGFEYLSQNHYLTRELGRWRSQYNEKYVLYVEELLKLSLTSFERPNKED
GFVRRSGNRKYRQSVFLPAHLYGELCKHEKGAKLLEREGACKDLTETLSQQIKLLGHTHD
SSKSPETEMNGCENKLAGEDGQMLKLKSCLWALAHIGSTVWGLALLRSSGALPIISKLAS
ETDKPSIKGTCVYCLSAVAQTIPGVEELRCLGWESVLTMVNTLDDQREIPDTPIVPVVTP
HLKRNLSIKKSTSRVSQRSNASSNSKSSRFSPDGSISNLSLTTSDLSPSSSANEEILKPW
SLSRNESLKKKSKKKPSSQDDYIFITTQTSASDSIASSEQSVSETGGSMTSPLSSKTPSP
SNDITMTSYDSSFSSLKKSDWKKHGAPVAVGNGPKPRMRDRFLEFFTKKSRSKSLAYGSL
FGMNHKHHDDSSSGYVSDHIATNDHLATGDNHDNDDVVKDHPPLALGSSDRAIGRLHSST
TLTSSSNVSIETVKTSEIRSDDQHKNGSRTSLWNTNNSGQTGSALGEQEKMVYDEKTIDK
FDSQRSRSLPDMLELSKPTLEAPRTLNLVRKPKLNGEIPQGVVAPVQPPQVLVHADTLEL
KSPTACMPQYVKVETKTCNVVENKTNLLTSDASEKSEFAFSRLRGNTQISQDSGIVDSTS
PSRNLERCDVIVVDSDETMSELEPGWKLTKPKGITAARALRNRTDSLTRPEMEVLPHEDK
ISILHQTRYVGIVVPSDFNKFMKRVDLDKEESKETKPSLVALYEDMMDKDQDPGETPTKP
TRS
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccttgctgtgatcccagcatcttctaagagggttaaaagccttcggatccga
actggaagatcaggatcaggtcgttttgaacacaatgatgatacgattccaattgattta
tcccgagatcccaatgagatactgaaggaaattctaatcaacgtctcggccaagcagaga
gtttcaacggaacgaaaacttggccatctcaataacttagtgaagttattctgcagtgta
ccagatgatgatgtcatcacaattcctatggaagttattatgacatgtttgaaaccgaca
ctggtgtccgaagtaaaagaagtccgagctgcaggtgttcgagcttacagatatcttatc
aatgatgaaccgagcaaaaggatttttatggatctcaaactagactacctcattactaaa
tgtcttgacatcagtcatttcaacgaagtggagcgaatccaagcgatccgattggttcgt
aaaattgcacatattaaacaacggaccaatgagacgataatcccactttccctcgcttcg
tgtatcgtttctgtgtcactaggtggagctgaagagcgagaccgagtttatcgtacttgc
ctcgctgtgctgtgcgaacttgcgttgctccagccctggttagtggtgcgttgtaatggg
attcttgcattgatcaacgctgtgttggaatgccatatgtaccagaggataaacgaatgt
ttgtgcatgtcgctcatgcatattatcaaccacccatgcataagagaatggcaccccacc
atattagatgttggacccacccttgccccatacactgagcttaactatagattccatgca
gatgtggaagatacaaagttaaaagacgagctagaaatgcgattcgctgcaagcaaaatg
gcgatcgtatcgttgctacgaacgtgggacggacttttccacatcgtgaaatcaagggat
atgattggttcgctcgtaaacgcaattcgcataccttacaataacatcagaagaggaata
ttcgccgttctttgtgatttattttacttcaatgaaccaacatggactgaagattttgaa
acagcattgaaagccgcagctcctggtagtttccgtgacaactggcgacattctgaaggt
tttgttgtcgctgaaacaaagtcacttctccccgttcattcatcctcgcgaccggacctc
gtaaactcacatctagcaatcctgctttcttcttttgtacagagcgggctactgcaggca
ttaagcagtgttgccgtgtccagtgatgcgcaatcagcgatatcttccaccatattatta
ggatcattgttgcacttgaatagtcgattgttacctcataaagatgtttccaccaatcaa
tggttgctcccggatttattaaaaaataccggaactaacttggaggagaatttaagaatc
aacttagctgtgaaaaggttgggtgaagtccatgccatgttaacaagcccccctaatacg
tatagtttatatctcaaccaacttcaatacaatgtcaagcaaactaagagggagccatcc
tcccaaccacgatcccgcacatccagtggaacatccttggacacgactccaacgtccttc
tccctcatccggagaaatagatctttgaacatcatccgtgatcattcggaggaactgact
cttcttgctcttaaaaacacaaaagtgttaacaactaaagaaaaagaagactgggattgg
ggatctctatgttcccttctcttatctccaccatccatcatcttcctgcaaaacctagga
gtagatgaaaccgtccgaagattcttcaggaggttgatctacttctatcttccgtcgagt
aaattgttctcggcgatcgacctcgctcaagatggtgggcacgaccataacagaatatac
gtggtcacagcgtgtcacatggttcaattcctttccaactccgaccaggagggtcaacga
ttgttgcgcaatctagtagaggatattctcgcattcttaccaaagacaaacacagaaact
ggaggttacagcaggtcaaatgggtcacttggtgtcacatgtgcacgcgactattacctc
atattgggttcattgtcaggtcatcgacacggcgacaatatattacaacaatgcaaagtt
tataaatattacctggacctagcaagtgagaccacccatgagagtttgatcaaactaatg
atatccgggcttcgttacaaccaaaacaacaacgcacgagcagtgctaagtaaagttctt
aaaacctgtaacgaggcatcccgattatatgctaccggctttctcagagttttacttcga
acaaattgccccgggttccaccactgggggtcagagttgcttaccacccaactattcgac
cgtagtaacgaggtaacagcggaagcgatcgacatactccacgaggcgtgttatgataag
caatacctacgagcagtggtccgtttacgtccgacactccttcatcttggtgatcgtggt
tcgctgctcgtgtgtcgattcatctcagatcctaaaggattcgaatatctttcgcagaac
cattaccttactagggagcttgggaggtggcgaagtcagtacaacgagaaatatgttctc
tatgttgaagaattgctgaaactatcgctgacgagtttcgaacgaccaaataaggaagat
gggtttgtacgaagaagcggtaacaggaaatatcgtcaatctgtgtttctacccgcccat
ttatacggggagttatgtaagcacgagaagggggcaaagttactagagcgtgaaggggcg
tgcaaggatcttactgaaacgctgagtcagcaaattaaactgcttggtcatacccatgac
tcgtcaaaatcaccggaaactgagatgaatggatgtgagaataagttggctggtgaagat
gggcaaatgttgaagctgaaaagttgtttgtgggctttggcgcatattggttctactgtg
tgggggcttgcattgttacgatccagtggtgcgttgcccatcatatcaaagttagcgtct
gaaactgacaagccatcaatcaaaggaacttgcgtttactgtttgagtgccgtcgcccaa
actatacctggtgtagaggagcttagatgtcttggttgggagagcgtactaacaatggtg
aacacccttgatgaccaaagggaaatccccgacacccccattgtacccgtagtcacccca
catttgaaacgaaacctgtcaatcaaaaaatccacttcaagagtttcacaacgatccaat
gctagtagtaactccaagtcgagcagattcagccccgatggaagcatcagtaacttaagc
ttgacgacctctgacctttcaccttcttcctcagccaatgaggagatcttaaaaccgtgg
tcactcagtcggaacgagtcattgaaaaaaaaatcaaagaagaagccctcctcccaagat
gattatattttcatcacgactcaaacctcggcaagcgattcaatcgctagttcagaacaa
agtgtttctgagactggaggttctatgacatcaccattgagcagtaaaacaccaagtcca
tccaatgacatcaccatgacatcatacgactcatcattttcctcgctgaagaaatctgat
tggaagaaacacggagctcccgttgccgtgggtaacggaccaaaaccgaggatgcgtgac
cgatttcttgaattctttacaaagaaaagtcgaagcaaatccctcgcttacggatcattg
tttggtatgaaccataagcatcatgacgactcatcttctggttatgtgtcggatcacata
gcaaccaacgatcacctagcaacaggagataaccatgacaacgacgacgttgtaaaggac
catccaccgttagcgctagggagcagcgaccgcgcgattggtcgattacacagctccact
acgcttacttcatcttctaatgtttccattgaaacggtgaaaacttcggaaatccgcagt
gatgaccaacataaaaacggctccaggacatccttatggaacactaataattcagggcaa
actgggtcagcactgggggagcaagaaaagatggtttatgacgaaaaaacaatcgataaa
tttgattcgcaacgcagcaggtcgttgcctgatatgttggagttatctaaaccaacacta
gaggcgccaaggacgttaaatcttgttcgaaaaccgaaattaaacggagaaatccctcaa
ggtgttgtggcacctgtacagccccctcaagtcttagttcacgcagatacattggaatta
aagtcacccactgcttgcatgcctcagtatgttaaagtggaaaccaaaacctgcaatgtg
gtggagaataaaacaaacttgctcaccagtgatgcgagtgagaaaagtgagttcgctttc
agcaggttacgtggcaacactcagatatcgcaagattccggaatcgttgattcaacttcc
ccatcgaggaatctggagcgttgtgatgtcatagtagtggatagtgatgaaacaatgagt
gaattagaaccaggatggaagttaacaaaaccaaaaggtatcacagccgcccgtgcttta
cgaaatagaaccgacagtcttaccagacccgagatggaggttctaccacacgaagataaa
atatcaattctacatcagactcgttacgttggcattgttgtaccaagtgactttaataag
tttatgaagagagttgatttggacaaagaagaatcaaaggaaacaaaaccttcattggtt
gcattatatgaagatatgatggataaggatcaagaccctggggaaacccctacgaagccc
acccggtcataa
DBGET
integrated database retrieval system
