Ciona intestinalis (yellow sea squirt): 100186880
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Entry
100186880 CDS
T01056
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00330
Arginine and proline metabolism
cin00480
Glutathione metabolism
cin01100
Metabolic pathways
cin04148
Efferocytosis
Module
cin_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
100186880
09106 Metabolism of other amino acids
00480 Glutathione metabolism
100186880
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100186880
Enzymes [BR:
cin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
100186880
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
100186880
NCBI-ProteinID:
XP_002131383
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Position
1:complement(5872867..5883485)
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AA seq
551 aa
AA seq
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MKQDCSVETSAVEIYPTINTSEIIASKILNDGREDHDNGFFICDLGDVMKKYIRWQKNFP
RVIPHYAIKCNPDEILLKMLIGLGTGFDCASKSEIRQMLALGARPEQIIFANPCKQASHV
RYARDNNVKRIVFDNVEELIKMKKNFPTADLVLRIQTDDSQSICRFSMKYGAHPDVCKQL
LDTAHKMNLNVVGISFHVGSGCQDVQAFVKALQNARVLFDYAECIGYKLNLLDIGGGFPG
TEDVNLKFEEIASVVNMTLKELFPMEEFPHVDVIAEPGRYFAASAYTLASNIIAKREVMR
DVTEETVCEQTGHTDTIENRSSPTRCDEPAYMYYINDGLYGSFNCLFYDHAHVTPKLLKE
PSEIDMLYSSSVWGPTCDGLDRICELVQLPQLDVGNWILWEDMGAYTMAAGSSFNGFKTS
KVYYVISDLENNLLQDQIAKKELPGVVFGPASVDDTSSSEDEPCGDIDTFYNKQLSSYPS
LLTKMQCTKLVVSQLKFRIYNMILRCYGFSNTFTLVLTFVWVKHSLKARILRNVISLSKL
CTQLSFICKIW
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagattgtagtgttgaaacttctgctgttgaaatatacccaacaataaacacc
agtgaaatcattgcatccaagattttaaatgatggacgtgaggaccatgataatggcttt
ttcatatgtgatcttggcgatgttatgaaaaaatatatccgctggcagaagaatttcccc
agggtcattcctcattatgcaatcaaatgcaatccagatgaaatccttcttaagatgtta
attggtctcggcactggctttgactgtgcaagcaagtcggaaattcggcaaatgctcgcc
cttggtgcgcgaccggaacaaatcatttttgcaaatccgtgcaagcaagcctctcatgtg
aggtatgccagagataacaatgtcaagagaattgtatttgacaatgttgaagaactgatc
aaaatgaagaagaattttccaacagcagatctagttcttcgcatccaaactgacgattct
caatccatctgccgcttcagcatgaagtatggcgctcatcctgatgtatgcaaacaactg
ctggatactgctcacaaaatgaatctgaacgttgtgggaataagcttccacgttggcagt
ggttgccaggatgtacaagcgttcgtcaaagccttgcagaacgcgcgggtcctgtttgat
tatgcagagtgcatcggatataagctcaacctgcttgacattggtggcggattccctgga
actgaagacgtgaatttaaagtttgaagagattgcatccgttgtcaacatgacactgaaa
gagctatttccaatggaggaatttccgcacgtggatgtaatagcagagccaggtcggtat
ttcgcagcttcggcttacacattggcatccaacattatcgcaaagcgcgaagtaatgcga
gacgtaaccgaagaaacagtttgcgaacaaacagggcacaccgatacaattgaaaaccga
tcttcaccaacacggtgtgacgaaccagcttacatgtattacatcaatgatggcttgtac
ggatccttcaattgcttgttctatgaccacgctcatgtgacgccaaaactcctcaaggag
ccaagtgaaatagacatgctatactcgtccagtgtgtggggtccgacatgcgatggttta
gatcgcatatgcgagcttgttcagttgcctcaactggatgttggaaactggattttgtgg
gaggacatgggcgcttataccatggcagccggttcttcattcaatggtttcaaaactagc
aaggtttattatgtgatttcggatctcgagaacaatttgctgcaggatcaaattgcaaag
aaggaattacctggcgtcgtcttcggacctgcatctgtagatgataccagcagctctgag
gacgaaccgtgtggcgatatagatactttctacaacaagcaattgtcgtcctacccgtcc
ttgttgaccaagatgcaatgtacgaagcttgtcgtatcccagttgaagtttagaatttat
aacatgattttaaggtgctatggtttcagcaacacgttcacactggtcttaactttcgtt
tgggttaaacactcgttaaaagcacgaattcttagaaatgtaatatcattatctaaattg
tgtacacaactgtcttttatctgcaaaatttggtga
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