KEGG   Ciona intestinalis (yellow sea squirt): 100186894
Entry
100186894         CDS       T01056                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100186894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cin03041]
    100186894
   03400 DNA repair and recombination proteins [BR:cin03400]
    100186894
Spliceosome [BR:cin03041]
 Complex B
  Other components
   Prp19 complex
    100186894
 Complex C
   Prp19-CDC5 complex
    100186894
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    100186894
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 100186894
NCBI-ProteinID: XP_004225543
LinkDB
Position
1:complement(6339860..6345783)
AA seq 775 aa
MPRITIKGGVWRNTEDEILKAAVMKYGLNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAHNEEDEMGGDDP
RKLKPGEIDPAPETKPARPDPVDMDEDEHEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLASLQKRRELKAAGIAIRKKRRKKGRIDYNAEIPFEKKPALGFYDVAEEVFDPLDPNFK
RLRQDHLDKELARVKEEREKIKDKQKNKDKDVASIINNKNAEPAKKRSKLVLPSPQISDM
ELEEVVKVGQAAKLAIEESGVPTSDSLLADYSVTPSTSNLRTPRTPMPSSDTVMQEALNV
MALTNVDTPLKGGTNVPVDTDFSGITPARPDIKTPNTVIATPFRTPSEAGTSDGMTPAMP
TPRSITSTPGFTPRRDKLNINREDMTPFNPKEERLNLRATLSTLPTPRNDFEIVLPENED
GMDGDHHDKDGSDMVEDAADVEARKQAAIEAELAEQLARRHASVRKELPRPTVINETILR
QPTTTQLDELQKAEEAIKREMVTMLRHDALNNSAPNQIPGKGKKANSMSAHTQYLSKYPY
EEISPEELEDAKNLLNKEIEVVKTAMQHGNISLDVYTKVWRDCYNQVLFVPSENRYTRAN
RASKKDRIEALEKQLETNRNHMTKEARQAAKLEKKLKVLLGGYQQRSTSMIKQFTEIIDQ
LYSSRIELNTFQELLRAEKGAIPKRLEAMENDYRVQVERERELQKRYAELVKQDG
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgcctagaattaccatcaaggggggtgtatggagaaatactgaggatgagattttgaag
gctgctgtaatgaagtatgggctcaaccagtggtcacgtattgcgtcacttctgcatcga
aaatctgccaagcaatgcaaggcaagatggtatgaatggttagacccaagtatcaagaag
acagagtggtctcgagaagaagaagaaaaactacttcacctcgctaagttgatgccgaca
caatggaggacaattgctcccatcataggaagaactgccgctcagtgtttggagcattat
gagtatttgcttgataaagcagctcataatgaagaggatgagatgggaggagatgatcct
cggaagctcaaacccggtgagatcgatcctgctcctgaaaccaaacctgctcgccctgat
ccagtagacatggatgaagatgagcatgagatgttgagtgaggcaagagcgagattggcg
aacacgcagggaaagaaggcgaaacgtaaagcaagagagaaacaattggaagaagcacgt
cgtcttgcttctttgcaaaagcgtagagaacttaaagctgcaggaattgcaatccgtaaa
aagcgcaggaagaaaggaaggatagactacaatgcagaaatcccatttgagaagaaacca
gccttaggtttttacgatgtggcagaagaagtatttgatccactcgatccaaactttaag
aggttgaggcaagatcatctggacaaagaacttgcaagagtaaaagaagagcgtgagaag
ataaaggacaaacagaagaataaagataaggatgtcgcatctattataaacaacaaaaat
gctgagccagcaaagaagcgttccaagcttgttcttccttcaccacagatttctgacatg
gaattggaagaagtagtgaaagttgggcaagctgcaaagttagcaattgaagaaagtgga
gttccaacatcggactctctgcttgctgattacagcgtaacaccaagcacgtctaatcta
cgcacaccaagaactccaatgccatcatcagatactgtcatgcaagaagcactgaatgta
atggccctcactaatgtggacaccccacttaaaggtggaacaaacgttccagttgatact
gacttctctggcatcacacctgccagaccagatatcaaaacaccaaacacagttattgca
actccattcagaacaccttcagaggctggtacaagtgatggtatgacaccagcaatgcca
acaccaagatccattaccagcacaccaggtttcacaccaagacgtgataaacttaacatc
aatcgggaagatatgactccatttaaccccaaggaggagcgtttgaatttgagagccacc
ttgtccacactaccaaccccacgaaacgatttcgaaattgtgttgccggagaatgaggat
ggaatggatggtgatcatcatgataaagatgggagcgatatggtggaggatgctgcagat
gtggaagcacggaagcaagctgctattgaagctgagttggcggagcagttagcacggcga
cacgcatcagttcgaaaggagctgcctcgacctacagtgataaatgaaactattttacga
caaccaaccactacacaactggatgaattgcagaaggcagaagaagccattaaaagagag
atggtcacaatgctgagacatgatgccttgaataactccgcaccaaaccagattccagga
aaaggaaagaaggcaaacagtatgtccgcacacactcagtatttgagtaaatatccatat
gaggaaatctcacctgaagagttagaagatgccaagaatctgctcaacaaagagatagag
gtggtgaaaacagcgatgcagcatggaaatatatctcttgatgtttacaccaaagtgtgg
agagattgctataatcaagttctgttcgtaccaagtgaaaatcgttacactcgagctaac
agagcatcgaaaaaagatcgaattgaagctcttgaaaagcaattggaaacaaatagaaat
catatgacgaaagaagcaagacaagctgctaagctagaaaagaaacttaaagttttactg
ggaggttaccagcaacgtagcacctccatgatcaagcaattcactgagatcatcgaccaa
ttatactccagccgtattgagctgaacacattccaagaacttctgcgagcagaaaaggga
gccatacccaagagattagaggcaatggaaaatgattaccgtgtgcaagtggagcgtgaa
cgcgaacttcaaaagagatacgccgaacttgtgaaacaggatggttga

DBGET integrated database retrieval system