Ciona intestinalis (yellow sea squirt): 100186905
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Entry
100186905 CDS
T01056
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase I, mitochondrial-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cin03032
]
100186905
Enzymes [BR:
cin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100186905
DNA replication proteins [BR:
cin03032
]
Eukaryotic type
DNA Topoisomerases
100186905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
HAD_2
Motif
Other DBs
NCBI-GeneID:
100186905
NCBI-ProteinID:
XP_026693862
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MEVTSSQNGFNSESPQNHKSNKTREHKKKKKYVLGSDGKPKLGPDGRPIRIKSEHKLKKQ
INHTGDAIQIKKEKPEIVSPKAEKRRSDCEAVEKLKKKIKKEKHAEKRKHDSDQEIRQKK
LFQKKIVKQEIESPTKVKKEKKEEGDDKWKWWEEKGNEKDSGIKWKFLEHKGPVFAPPYE
PLPSSVLFKYDGKPMKLSLEAEEVMTFYAKMLDHEYXTQHILINETSYIXXNLQVMNKQE
RSTITDLGKCNFRDVCSYFQQKSEERKARSKEEKQEEKKKNEALIEEFGFCDWDGHREKI
GNFRLEPPGLFRGRGNHPKMGKLKKRIIPENITINCSKNSKIPKPPAGHKWKEVRHDNAV
TWLVSWTENVQNQNKYIMLNPSSRVKGEKDWQKYEVARNLKSKVDRIREDYMRDLKSDEM
MVRQRAVALYFIDKLALRAGNEKEDGESADTVGCCSLRCEHIKLHKHLDGKDFIVEFDFL
GKDSIRYYNKVPVLKQVFKNLVLFTENKEGPDDLFDRLNTSTLNKYLNSLMDGLTAKVFR
TYNASITLLNQLLELTDPDDENVASKILSYNRANRAVAVLCNHQRAAPKNFSEQMGRMNE
KIEKKQRDIQDAKQETKSAKSDYKHNKSEAKRKAYEGKKKKVERLQEQLIKLEVQATDKE
ENKEIALGTSKLNYLDPRITVAWCKKYSVPIEKCYNKTQRDKFAWAIAMVDDTYVF
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgacttcgtcacaaaatggtttcaacagcgaatctcctcaaaatcacaaaagc
aacaagaccagggaacataaaaaaaagaaaaagtatgtcttgggttcggatggtaaaccg
aagcttggaccagacggtcgaccgataagaatcaaatcggaacataaacttaagaaacaa
atcaatcatactggagacgcaattcaaatcaaaaaagaaaaaccagaaatagtttctcca
aaagccgaaaaaagaagatcggattgtgaggcggttgaaaaactcaaaaagaaaataaag
aaagagaaacacgctgaaaaaagaaaacacgattctgaccaagaaattcgacagaaaaag
ctgtttcagaagaaaattgtgaaacaagaaattgaaagcccaacaaaagtgaagaaagag
aagaaagaagaaggagatgataaatggaaatggtgggaagagaaagggaatgaaaaagat
agcggaattaaatggaagtttcttgaacataagggacctgtgtttgctcctccgtatgaa
ccattgccgtcatctgtattgtttaagtacgacggtaaaccaatgaagttaagtttagag
gccgaggaagtgatgacgttttacgctaaaatgctagatcacgaatatnaaacccaacac
atcctaataaatgaaacatcatacatataatgaaacttgcaggtgatgaataaacaggaa
cgttcaacaatcacagacctcgggaaatgtaattttcgagatgtttgttcgtattttcaa
caaaagtcagaagagagaaaagcgaggtctaaggaggagaaacaagaggaaaaaaagaag
aacgaagctttgatcgaagagtttgggttttgcgattgggacggacatcgtgagaagatc
ggaaactttcggttggaacccccagggttatttagggggcgggggaatcacccaaagatg
ggtaaactgaagaaacggattattcccgagaatattacaataaactgcagcaaaaactcc
aagataccaaagccacccgctggtcataagtggaaggaagttcgtcatgacaacgctgtg
acgtggttagtgtcgtggaccgagaatgttcagaaccagaataaatacatcatgttaaac
cccagctccagagtcaagggagaaaaagattggcagaaatacgaagtagcacgtaatttg
aaatccaaagttgatcgtatacgtgaggattatatgagagatttgaaaagcgacgagatg
atggttcggcaacgtgctgtcgcgttgtattttattgataaattggcgttgagagcaggc
aatgagaaagaggacggagagtcagctgacacggtcggttgctgttcgcttaggtgcgaa
catatcaaacttcataaacacctggatgggaaagacttcattgtcgagtttgatttcttg
ggaaaagattcgattcgatattataataaagtgcctgtgcttaaacaggttttcaagaac
ctcgttttattcacggaaaacaaagaaggacccgatgatttgttcgatcgcttgaataca
tccacgttgaacaaatacctcaattcgctcatggatgggttgacggccaaagttttccga
acttacaacgcttcaattactttgctaaaccaactgctggaactaactgatcccgatgac
gaaaacgttgcatcgaaaatcttgtcgtacaatcgtgccaaccgtgctgtggcagttttg
tgcaaccatcagcgtgcggcaccaaagaactttagcgaacaaatgggaagaatgaatgaa
aagattgaaaagaaacagcgggacattcaagatgcaaagcaagaaacaaaaagcgcaaaa
tctgattataaacataataaaagtgaagcaaagagaaaagcttacgaaggaaaaaagaaa
aaagttgaaagattgcaggaacaactaattaaactggaagttcaagctacggataaagag
gaaaacaaagagattgctttaggaacttcaaaactaaattatcttgacccaaggattact
gttgcgtggtgcaaaaagtacagcgtcccgattgagaaatgctacaacaaaactcaacgc
gataaatttgcgtgggcgatcgctatggttgacgacacatatgtgttttag
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