Ciona intestinalis (yellow sea squirt): 100186952
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Entry
100186952 CDS
T01056
Name
(RefSeq) RNA-binding protein FUS-like isoform X1
KO
K13098
RNA-binding protein FUS
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03015
mRNA surveillance pathway
cin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100186952
09122 Translation
03015 mRNA surveillance pathway
100186952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100186952
Spliceosome [BR:
cin03041
]
Complex A
Other components
Complex A specific factors
100186952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
100186952
NCBI-ProteinID:
XP_009859710
LinkDB
All DBs
Position
9:complement(3620252..3627527)
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AA seq
493 aa
AA seq
DB search
MASQDQGYGSQQHNYGQSQPSRQQGGGYAQYPQQGQSHYQNSSYNQQQQQQQQHGYQQSP
QASGGASYQQSSQSYAQNQGQGQSGYDRMNNQYQGRPQQSSAPQQRDTSSAGSKSDSYSA
DSGGYGQQAMYGSNQQSYGQSNQSYQMPSNNGRDTTSQRSGGSGSYGQDSSESQGYGGED
GRGRGGNRGNRGRDDGNYQRGGYNNSRGGYGDSRGGGGSYGDSRGSYGDSRGSYGNSGGG
YNDSRGGYGGQDRGETRGRGGGRGGYEGRGGFRGGYDSSENRGRQGESGNTRDHSDGGSG
AASSVDNTPGPASDTIFVQGMGQNITKESIAEYFGQIGIIKKDKRTQEPRIYVYMDKEIN
QPKGECTVTYDDPPSAQAAINWFNNKEWNGNLLSVSFAQQRASAGPGGFSGRGRGRGGFG
DRGRGRGRGGGGRDFGDRRGYDGGGRGGFRGRGDRGGGRGGYGGRGGDRGGRRDGGGGKW
RGGPPQGGRSGPY
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaggatcaagggtacggttcccaacaacacaactatggccaaagtcaacca
agtcggcagcagggaggtgggtatgctcaatatccacaacaaggacaatctcattatcag
aattcttcatataatcaacaacaacaacaacaacaacaacatggttatcaacaatctcct
caagcaagtggtggtgcaagctatcaacaatcaagtcaaagttatgctcaaaatcaaggc
caaggtcaatctggatacgatagaatgaacaatcaatatcagggaaggcctcaacagtcg
agtgcaccacaacaaagagatacaagttctgctggaagtaaatccgacagttattctgca
gatagtgggggttatggtcaacaggctatgtacggatcaaaccaacaaagttatgggcaa
tctaaccaatcatatcaaatgccaagcaataatggaagagatacgacttcacaaagaagt
ggtggcagtggttcatatggccaagatagctctgaatctcagggttatggaggtgaagat
ggtcgtggacggggtggtaaccgtggcaacagaggcagagatgatggtaactaccagcgg
ggaggttataataactcccggggtggttatggcgattctcgtggtggtggtggtagttat
ggggactctaggggtagttacggagattctcgtgggagttatgggaattccggaggcggg
tacaatgactcaagaggagggtatggaggccaggatcgtggggagacacgagggcgagga
gggggaagaggcggctatgaaggaagaggaggtttcagaggaggatatgactcttccgag
aaccgtggacgacaaggtgaatcaggcaacacacgagatcacagtgatggaggtagtggt
gcggcctcatctgttgataatacaccaggaccagcaagcgacacaatctttgtgcaaggc
atgggtcaaaatattacaaaggaatctatcgctgagtattttggacagattggaatcata
aaaaaagataagcgaacacaagagcctcggatttacgtttacatggacaaagaaattaat
caaccaaagggtgaatgcacagttacatacgatgatccaccatctgctcaagctgccata
aactggttcaacaacaaggaatggaatggaaacttactgagtgttagttttgcccaacaa
cgtgcaagtgctggaccaggagggttttcagggagaggtcgaggacgtggtggatttgga
gatagaggtcgaggtcgtggacgtggaggtggtggaagagattttggcgatcgaagagga
tacgatggtgggggaagaggaggtttccgtggaagaggagacagaggaggtggtagagga
ggttatggaggccgaggtggtgaccggggcggacgcagagacggtggcggtggaaaatgg
aggggtggcccaccccaaggcggaaggtcaggtccttattaa
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integrated database retrieval system
