KEGG   Ciona intestinalis (yellow sea squirt): 100186959
Entry
100186959         CDS       T01056                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04145  Phagosome
cin04517  IgSF CAM signaling
cin04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:cin00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    100186959
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100186959
  09142 Cell motility
   04814 Motor proteins
    100186959
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cin03019]
    100186959
   03036 Chromosome and associated proteins [BR:cin03036]
    100186959
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cin04812]
    100186959
   04147 Exosome [BR:cin04147]
    100186959
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100186959
Chromosome and associated proteins [BR:cin03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100186959
Cytoskeleton proteins [BR:cin04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100186959
Exosome [BR:cin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100186959
  Exosomal proteins of other body fluids (saliva and urine)
   100186959
  Exosomal proteins of colorectal cancer cells
   100186959
SSDB
Motif
Pfam: Tubulin Tubulin_C DUF7281 Tubulin_3
Other DBs
NCBI-GeneID: 100186959
NCBI-ProteinID: XP_002122739
UniProt: F6UV18
LinkDB
Position
1:complement(9330153..9334392)
AA seq 447 aa
MRECISLHIGQAGVQIGNACWELYCLEHGIQPNGLVKSGDQSDAVGTFFQTTNGGRHIPR
AIFVDLEPTVIDEIRTGDYKELFHPDQMITNKEDAANNYARGHYTVGKEVIEKVTDRIQK
LSEGCEGLQGFLIFHSFGGGTGSGFTSLLMERLSIDYGRKSKLEFAVYPAPKISTAVVEP
YNSVLTTHTTLEHTDCAFMVDNEAIYDICTNKLEIGRPIYQHLNRVIAQVVSSITASLRF
EGSLNVDLTEFQTNLVPYPRIHFPLATYAPILSSEKAKHEQMTVGDITNACFEPANTLVK
CNPRDGKYMACCMLYRGDVVPKDVTAAIAAVKQKRSIQFVDWCPTGFKVGINHQPPTQVP
GADMAKLGRALCMLSNTTAISEAWARLNHKFDLMYSKRAFVHWYVGEGMEEGEFSEARED
LAALEKDYEEVGMDSTEDGQEDEAEEY
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagagaatgcatttcacttcatattgggcaagctggcgttcagatcggtaacgcatgt
tgggagctgtattgcttagaacatgggatacaacccaacggtttggtcaaaagtggagac
caaagcgacgcggttggaactttcttccagactacgaacggtggtcgtcatataccaaga
gcaatattcgttgatttagaaccaactgtaatcgacgagattcgcacgggtgattacaag
gagttatttcacccggatcaaatgatcactaacaaagaagatgcggcaaataactacgct
cgtggtcactacaccgtcggtaaagaagttattgaaaaagttactgatcgtattcaaaaa
ctctctgaaggatgtgaaggactgcagggtttcttaattttccactcgtttggtggcggt
acagggtcggggtttacatcattgctgatggaaaggctttcgattgattacggacgaaaa
tcgaaactggagtttgccgtttacccggccccgaagatctccactgccgttgtcgagcct
tacaactcggtgttgacaacacacacaacactggagcatacagattgtgcgttcatggtc
gacaacgaggcaatctatgatatttgcaccaacaagcttgaaattggtcgcccaatatac
cagcatcttaaccgagtcattgctcaggttgtttcttcaatcactgcatctctaaggttc
gaaggatcattgaacgttgatctaacagaattccaaaccaacttggtgccgtatccacga
atccactttccgcttgccacctatgcgccaatcttatccagcgaaaaggccaaacatgaa
cagatgacggttggtgatatcaccaacgcttgctttgaaccagccaacaccttggtgaaa
tgcaaccctcgtgatgggaagtacatggcgtgttgtatgttgtacagaggtgacgtggtg
ccgaaggacgtaacagcagcaatagcagccgttaaacaaaaacgatctatccagtttgtc
gattggtgtcccactggtttcaaagttgggatcaaccatcaaccgcctacacaagttccg
ggagcagacatggcgaaactaggcagagctctctgcatgctaagtaacacaactgcaata
tcagaggcatgggcaaggcttaaccacaagtttgacttgatgtattcaaagagagcattc
gtccactggtacgttggagagggaatggaagaaggggaattctcggaggcgagagaagac
ctcgctgctcttgagaaagattatgaagaagttggaatggactcgaccgaagacggacaa
gaagacgaagccgaagaatactag

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