Ciona intestinalis (yellow sea squirt): 100186959
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Entry
100186959 CDS
T01056
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
cin04517
IgSF CAM signaling
cin04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100186959
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100186959
09142 Cell motility
04814 Motor proteins
100186959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100186959
03036 Chromosome and associated proteins [BR:
cin03036
]
100186959
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100186959
04147 Exosome [BR:
cin04147
]
100186959
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100186959
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
100186959
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
100186959
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100186959
Exosomal proteins of other body fluids (saliva and urine)
100186959
Exosomal proteins of colorectal cancer cells
100186959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
DUF7281
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
100186959
NCBI-ProteinID:
XP_002122739
UniProt:
F6UV18
LinkDB
All DBs
Position
1:complement(9330153..9334392)
Genome browser
AA seq
447 aa
AA seq
DB search
MRECISLHIGQAGVQIGNACWELYCLEHGIQPNGLVKSGDQSDAVGTFFQTTNGGRHIPR
AIFVDLEPTVIDEIRTGDYKELFHPDQMITNKEDAANNYARGHYTVGKEVIEKVTDRIQK
LSEGCEGLQGFLIFHSFGGGTGSGFTSLLMERLSIDYGRKSKLEFAVYPAPKISTAVVEP
YNSVLTTHTTLEHTDCAFMVDNEAIYDICTNKLEIGRPIYQHLNRVIAQVVSSITASLRF
EGSLNVDLTEFQTNLVPYPRIHFPLATYAPILSSEKAKHEQMTVGDITNACFEPANTLVK
CNPRDGKYMACCMLYRGDVVPKDVTAAIAAVKQKRSIQFVDWCPTGFKVGINHQPPTQVP
GADMAKLGRALCMLSNTTAISEAWARLNHKFDLMYSKRAFVHWYVGEGMEEGEFSEARED
LAALEKDYEEVGMDSTEDGQEDEAEEY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagagaatgcatttcacttcatattgggcaagctggcgttcagatcggtaacgcatgt
tgggagctgtattgcttagaacatgggatacaacccaacggtttggtcaaaagtggagac
caaagcgacgcggttggaactttcttccagactacgaacggtggtcgtcatataccaaga
gcaatattcgttgatttagaaccaactgtaatcgacgagattcgcacgggtgattacaag
gagttatttcacccggatcaaatgatcactaacaaagaagatgcggcaaataactacgct
cgtggtcactacaccgtcggtaaagaagttattgaaaaagttactgatcgtattcaaaaa
ctctctgaaggatgtgaaggactgcagggtttcttaattttccactcgtttggtggcggt
acagggtcggggtttacatcattgctgatggaaaggctttcgattgattacggacgaaaa
tcgaaactggagtttgccgtttacccggccccgaagatctccactgccgttgtcgagcct
tacaactcggtgttgacaacacacacaacactggagcatacagattgtgcgttcatggtc
gacaacgaggcaatctatgatatttgcaccaacaagcttgaaattggtcgcccaatatac
cagcatcttaaccgagtcattgctcaggttgtttcttcaatcactgcatctctaaggttc
gaaggatcattgaacgttgatctaacagaattccaaaccaacttggtgccgtatccacga
atccactttccgcttgccacctatgcgccaatcttatccagcgaaaaggccaaacatgaa
cagatgacggttggtgatatcaccaacgcttgctttgaaccagccaacaccttggtgaaa
tgcaaccctcgtgatgggaagtacatggcgtgttgtatgttgtacagaggtgacgtggtg
ccgaaggacgtaacagcagcaatagcagccgttaaacaaaaacgatctatccagtttgtc
gattggtgtcccactggtttcaaagttgggatcaaccatcaaccgcctacacaagttccg
ggagcagacatggcgaaactaggcagagctctctgcatgctaagtaacacaactgcaata
tcagaggcatgggcaaggcttaaccacaagtttgacttgatgtattcaaagagagcattc
gtccactggtacgttggagagggaatggaagaaggggaattctcggaggcgagagaagac
ctcgctgctcttgagaaagattatgaagaagttggaatggactcgaccgaagacggacaa
gaagacgaagccgaagaatactag
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