Ciona intestinalis (yellow sea squirt): 100186974
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Entry
100186974 CDS
T01056
Name
(RefSeq) solute carrier family 22 member 4-like isoform X1
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100186974
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
100186974
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
100186974
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GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
100186974
NCBI-ProteinID:
XP_018669301
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Position
10:973569..982293
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AA seq
561 aa
AA seq
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MSYEDILKAVGGFGRYQKLLTLLLVVSGIPNGYLVLTIVFVGMTPPHRCCVPGIEECLRN
SSGPTPNYDLPKATWEAHIPHHDIDGVKYSQCGMISTDSNTTKQCTNGWVFDIDSDRTTF
VTEWELVCDRSLYRPLLTALFMAGVMCGSTLSGFLSDRFGRRPVFLAGTFGMFVCFGLCG
ISTSPIMYAITLFLSGAMNLVNYATAYVLASEVISTSKRVITGTLTIAAFAIGYMLIPLL
AYFLPHWRTLYLITSLTGFLFIPYIWLIDESPSWLLSKGKFEEFWKLVRKIAKSNGVPEE
NVDELRACWKKEENKETAESWSDLFRHFKHRRVFATLLNKCFTWFSCSVAYYVLSLNTSN
FGGSPYINCFLAAAVEIPAYAIVILALKKIGRKSFVFGSLVCTGVFCGAVPYIDIVSTKG
AIASAMIGKLCVAACFSVIYLYCAELFPTPIRTTAVGLCSMSARVGAIVAPYLLYAGETY
SSLPYLIIFGLSFLSAFFILWLPETCLATLPESKNDMLRLKLNLKEIFKIHKIIGKGSEN
NNDANEDQKSVTEPLSVGVVA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatgaagatattttaaaagctgtagggggcttcggtcgttaccaaaagcttctt
accctcttactggtagttagcggtattcctaacggttatcttgttttgacaattgtgttt
gtgggaatgacaccaccccaccgttgttgtgtacctggcattgaagagtgtcttcgcaac
agcagtggaccgacaccaaactacgatcttccaaaagcgacttgggaagcccacatacca
caccacgatatcgacggtgttaagtacagtcaatgtggcatgatttctaccgatagcaac
acgacaaagcaatgtactaacggttgggtgtttgacatcgattcggatagaactacattc
gtaacggagtgggaattagtttgtgacagatcattgtatcgacctctcctaacagcatta
ttcatggcgggcgttatgtgtggatctacattaagtggctttttatctgacaggtttggt
aggcgacccgtattcttggctggaacatttggcatgtttgtttgctttggtttgtgcggt
atttccacatcaccgatcatgtatgctatcactttgtttttgtctggagccatgaacctc
gtaaactatgcaactgcctatgttcttgcttctgaagtgattagtacaagcaagcgagtg
atcacgggcacattaactattgctgcgttcgccattggttatatgttaataccattgctg
gcatacttccttccacactggcgaaccctttaccttattacaagtcttactgggtttctg
tttattccatatatatggctaatcgacgaatcaccaagttggcttttatcaaaaggcaag
tttgaagagttttggaaacttgtgagaaaaatagcgaagtccaatggagttcctgaagaa
aacgtcgatgaattgcgcgcctgttggaaaaaagaagagaataaagagaccgcggaatct
tggtcggatttgttccgtcattttaaacacagaagagtttttgcaacccttctcaataaa
tgctttacatggttttcgtgctctgtagcatattacgtgctttcactaaacacctcgaac
tttggcgggagtccttacataaattgcttcctggcggccgctgttgagattccagcatat
gctattgttattcttgcgctaaagaaaattggacgaaaatcgtttgtgtttggttctctg
gtttgcaccggtgtcttctgtggagctgtgccttatattgatatcgttagcacgaaagga
gctatcgcctctgcaatgattgggaagttatgtgtcgctgcatgtttttctgttatctat
ctctactgtgctgaactgtttcctactccaatacgaaccactgcagtaggactgtgttcc
atgagcgctagggtgggtgctattgtagcgccatatttactctatgcaggtgaaacatat
tcatcactaccttacctcatcatctttggactttcttttctatcagcattttttatatta
tggctgcctgagacttgtcttgctactctgcctgaaagtaaaaacgacatgttaagatta
aaactgaatttaaaagaaatctttaaaattcacaaaatcatcggcaaggggtcagaaaat
aataatgacgccaacgaagatcaaaaatctgttactgaacctttaagtgttggtgtcgtc
gcatag
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