Ciona intestinalis (yellow sea squirt): 100187032
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Entry
100187032 CDS
T01056
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi-like
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04080
Neuroactive ligand-receptor interaction
cin04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100187032
04082 Neuroactive ligand signaling
100187032
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
100187032
Ion channels [BR:
cin04040
]
Ligand-gated channels
GABA-A
100187032
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
100187032
NCBI-ProteinID:
XP_018670341
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All DBs
Position
14:complement(2139937..2149276)
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AA seq
494 aa
AA seq
DB search
MQLVLQIFVLSWLLINTTESGRGGPQSRYWRNPLRNLKYGAVVETMLDPDRYHKYIRPGI
DTGKPIVVNVSLSVTGLDRISDADMEYTVTFTLHQLWKDTRLDGTKSARGYSQILTMDGS
LGNRIWVPDTYIVNSHTSFIHDVTTRNGLIRLYPDGTVLYVLRITSTVSCTMKLHKYPMD
EQACKLALESWSFTEQDLIYKWDKEESCGSPSGSVTGMDNIVLLQFNLTKCSVYRELHSA
ALGNYSQLILEFRLKRNMLFFLMQTYLPSVLLVILSWVSFWINMNSVPARVGLGATTVLS
MTTLMIGVYNSGPKSTSYIKAIDFYVCVCYGFIFAALMEYAGAHFTVRRYATKANKLLDG
KHNDCKNKPKNGGHVEIDIEEEAVFSYPVNDQRESEPWQTSSNTNKLRAVSYSEEDAINK
RGFSDFEHSTFSTRKRNPGAKNVKNGCVVTKIKTLRHRVTRLERIDEYSRIIFPVAFVGF
NAVYWWVYLTMDDQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcagttagttttgcaaattttcgtgttgtcttggctgcttataaatacaactgaatct
ggaaggggcggcccacagtcaagatactggagaaacccgctcagaaatcttaagtacggt
gcagtcgttgaaacaatgttggatccagaccgatatcacaaatacatcagaccaggcatt
gatacagggaaacctattgtggttaacgtatcgctttcagttactggtttggacagaata
tcagacgccgacatggagtacaccgtaacatttacattacaccaactctggaaggacact
cgcctagacggaacaaaaagcgcacgcggatattcccagattttgacaatggatgggtcc
ctcggtaatagaatttgggtcccagatacttatatagtgaattcgcacacctctttcatt
catgacgtaacaacaaggaatggactgatccggttatatccggacggaaccgttctatac
gtgctccgaattacgagtacggtatcttgtactatgaagttacacaagtacccgatggac
gaacaagcatgtaaacttgcacttgaaagctggtcttttaccgaacaggacttaatttat
aaatgggacaaagaggagagctgtggctcccccagcggatctgtgacgggaatggataat
attgttttgctgcaattcaacttgacaaaatgttcagtatacagagagttgcatagtgca
gcactaggcaattactctcaactgatccttgaatttcgactcaagcggaacatgctattc
tttctaatgcagacctatctgccatctgttttactggtcattctatcatgggtgtcgttt
tggattaatatgaattcagtaccagcccgggtcggcctgggggcaaccacagtactttca
atgaccactcttatgattggggtttataacagtgggcccaaatccacctcttatataaaa
gccatcgacttctacgtttgcgtttgctatggcttcattttcgctgcactaatggagtat
gctggagcgcacttcactgtacgacgctacgctaccaaagcgaacaaactattggacgga
aaacacaacgactgtaaaaacaaacctaaaaacggagggcatgttgaaatcgacatagaa
gaagaagcagtgttttcctatcccgtcaatgatcagagagaaagcgaaccgtggcaaact
tctagtaatacaaacaaattacgtgcagtaagttattcagaagaggatgctatcaataaa
cgaggctttagcgatttcgaacattcgactttctcgaccagaaagcgcaaccctggagcg
aaaaacgtgaagaacggatgtgtcgtcacaaagattaagacattacgtcacagagtgaca
cgattagaacgaatcgacgaatattcaaggattatttttcccgtagcttttgtcggtttt
aatgccgtatattggtgggtgtatcttaccatggacgaccagtga
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