Ciona intestinalis (yellow sea squirt): 100187060
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Entry
100187060 CDS
T01056
Name
(RefSeq) vang-like protein 2 isoform X1
KO
K04510
vang-like
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100187060
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Gene cluster
GFIT
Motif
Pfam:
Strabismus
DUF1690
Fumarate_red_C
Motif
Other DBs
NCBI-GeneID:
100187060
NCBI-ProteinID:
XP_002121953
Ensembl:
ENSCING00000003625
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Position
4:complement(3195658..3203798)
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AA seq
546 aa
AA seq
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MDTDKLQDNDSEYSLATNRSERSRHGHKRHRSHERGSRRHRNRGSGNELDDDYEGEKTVT
IRTPPMDGRHDSRATEGTISVNIPEDDNWGETNTFISGTTDVTQLSHESLAKLTKDIEAS
IGFRDCGYVGTIIFALISYLSPIAFVVMPKFLWDNSSPLSACGTSCKGTLISMSFKLLIL
LVASWAIFFRRQRTSMPKVFMFRSLIMVFVLLITLTYWLFYGIWILEQKEKDFQSIIEFS
DSMTNCLLFVHYLSLVLLELRHLQTTFVLEVIRTTDGERRFYNIGDLSIQRCSVWVLEKY
YCDFPVYNPALMRIPSRSARMKHINNTFKVYDVDGKPGNDTQGQNRAILAAVARRRDAGH
NERYYEEAEYERRVRKRRARLVAATEDAFTHIRKASEHEINTKGKSSNSVMECDAASEAI
FPALARSLQKYLRTTRQHQHYQVEDIHKHLAFCIKNEMTPKAFLQRYINPGSYLTYDPRH
DSSQWDLVSDEPLVNMLKDGTVFRLNQPEYSLVVTVRKSPRIGLQEVFIDPDSYRYVMHM
QSETSV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggacacggacaaattacaagacaatgattcagagtattctctggcaacaaacagatcg
gagcggtcacgacatggtcacaagcgacacaggtcacatgagcggggaagtcgtcgccat
agaaaccgaggtagtggaaacgagcttgatgatgattatgaaggtgagaaaacagtcaca
attagaaccccacctatggatgggagacacgacagcagagcaactgaaggaaccatctct
gttaacatacctgaggatgataactggggcgagaccaacacctttatatcaggaaccaca
gacgtcacgcaactcagtcatgaatcgcttgcaaaactgaccaaggatattgaagcttca
attggttttcgagactgtggttatgttgggaccattatatttgcccttatttcctacctt
tccccgatagcatttgtggtgatgccgaaatttttgtgggacaactcatctcctctttca
gcgtgcggcacctcatgtaaaggtaccctcatcagtatgtcattcaaactcctcatactc
cttgtagcatcatgggcaatatttttccgacgccagagaaccagcatgccaaaagtgttt
atgttcaggtctctgatcatggtatttgttcttctaatcacactcacgtactggctgttt
tatggcatctggattttggagcaaaaggaaaaagactttcagtcgataatcgagttctca
gacagcatgacgaactgcctcttattcgtgcattatctctcgcttgttttactcgaacta
cgtcacttacaaaccaccttcgtgctcgaagttattcgaaccaccgatggcgaacgacgg
ttctacaacattggagacttgagcatccagcgttgttcagtgtgggtgttggagaaatat
tattgcgactttcccgtgtataatccagccctgatgcgtataccttctcgtagcgcacgt
atgaagcatatcaacaatacatttaaagtgtatgacgtcgatggcaaaccgggcaatgac
acacaaggacaaaatcgtgcgattcttgcagcggttgctaggcgacgagatgcaggacat
aatgaaagatattatgaggaagcagaatatgagagaagagtaaggaagagacgagcaagg
ttggtcgccgccaccgaagacgctttcactcacattcgaaaagcaagcgagcatgaaatt
aacacgaagggcaagtcgtccaactctgtcatggagtgcgacgccgcctctgaggccata
ttccccgcgttggctagatcgttgcagaagtaccttcgcaccacacgtcaacaccaacat
taccaggtagaagatatccataaacatcttgctttctgtatcaagaacgaaatgactcca
aaagctttcctacaaagatacatcaatcccggctcttacttgacctatgatccacgtcac
gactctagtcaatgggacttagtaagcgacgaacctcttgttaatatgcttaaggacggc
acagtgtttcgacttaaccagcccgagtattccctcgtcgttaccgtgcgcaaatctcca
cgaattggtttgcaggaggttttcattgatcccgattcttaccgttatgtaatgcacatg
cagagcgagacgtcggtgtga
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