Ciona intestinalis (yellow sea squirt): 100187079
Help
Entry
100187079 CDS
T01056
Name
(RefSeq) serine/threonine-protein phosphatase alpha-2 isoform
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100187079
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100187079
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100187079
03019 Messenger RNA biogenesis [BR:
cin03019
]
100187079
03041 Spliceosome [BR:
cin03041
]
100187079
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100187079
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
100187079
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100187079
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100187079
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100187079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
100187079
NCBI-ProteinID:
XP_004227244
Ensembl:
ENSCING00000000707
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MADDKFNVDKIIASLLEVRGSRPGKSVQLSENDIRGLCLKSREIFLSQPILLELEAPLKI
CGDIHGQYYDLLRLFEYGAFPPESNYLFLGDYVDRGKQSLETIALLLAYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPLAAIIDEKIFCCHGGLSPDLQ
SMEQIRRIMRPTDVPDQGLLCDLLWSDPDKEVFGWGENDRGVSFTFGAEVVAKFLHKHDL
DLICRAHQVVEDGYEFFAKRQVVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADK
KKFPYGGLNAGRPVTPPRNSGNKQKPGKK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacaagtttaatgttgataaaattattgcaagtctcctggaggtacgaggt
tcaagacccggcaagagtgttcaactgagtgaaaacgacatcagaggtttatgtttgaaa
tcaagggaaatattcctcagtcaaccaattctattggaacttgaagctccccttaaaatc
tgcggggatattcacggccagtattatgaccttctgcggctttttgagtatggagctttc
cccccagagtcaaattatctctttcttggagattacgtggaccgtggaaagcaatcattg
gaaaccattgcccttctcctcgcttataagataaagtatccggagaatttcttcttactt
agaggcaaccatgagtgtgcgagcatcaatcgaatctatggtttctatgatgagtgtaag
cgacggtacaacatcaagttgtggaaaaccttcacggattgcttcaactgtctcccgctt
gctgccattattgatgagaagatcttctgctgccacggaggactctctcctgatcttcaa
tccatggagcagatccggaggatcatgagaccaaccgatgttccagatcaagggctattg
tgtgacctcttgtggtccgatcctgacaaggaagtcttcggatggggcgagaatgataga
ggagtgtcattcacgtttggtgctgaggttgtggccaagtttcttcacaagcatgacctt
gaccttatatgtcgtgctcaccaggttgttgaagatggatatgagttcttcgccaaacgg
caagtcgtcactctcttctcggctcctaattattgtggggagtttgacaacgcaggagca
atgatgagcgtggatgaaactctcatgtgctccttccagatcctcaagccagcagataag
aagaagttcccttacgggggtttaaacgccggacgcccggtcactcctcctcgtaattca
ggaaacaaacagaaacctgggaaaaaataa
DBGET
integrated database retrieval system
