Ciona intestinalis (yellow sea squirt): 100187080
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Entry
100187080 CDS
T01056
Name
(RefSeq) N-acetylglucosamine-6-sulfatase
KO
K01137
N-acetylglucosamine-6-sulfatase [EC:
3.1.6.14
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00531
Glycosaminoglycan degradation
cin01100
Metabolic pathways
cin04142
Lysosome
Module
cin_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
100187080
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100187080
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.6 Sulfuric-ester hydrolases
3.1.6.14 N-acetylglucosamine-6-sulfatase
100187080
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sulfatase
SGSH_C
Phosphodiest
DUF6396
Motif
Other DBs
NCBI-GeneID:
100187080
NCBI-ProteinID:
XP_002128609
Ensembl:
ENSCING00000009424
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Position
7:complement(5305934..5316086)
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AA seq
545 aa
AA seq
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MIKLLFIALFGCICTVEAQLVMSKASPPPNIVFILTDDQDTLLGGMDPLVKVKKLLQDEG
TTFTNMFTSTPLCCPSRASILTGRYSHNHETLNNTISGNCSSLYWQKTFETQTLAVAAQK
ANYRTFFAGKYLNQYGGKSVGGPQHVPVGWNQWFGLVGNSKYYNYTISDNGVPVQHGANY
HEDYLTDLLANRSVDFIHNHKMRYTQPFFMMISTPAPHSPWDSAPQYSKMYENNTAPHTP
SYNTKAVNKHWLVRQATHPMTKESMDYSDNAFRSRWRALKSVDDLVERVINALSKMKQLD
NTYVFFSSDNGYHLGQFSLPIDKRQLYEFDLRVPLIIRGPGVSKNVTRSEPIVNVDIAPT
VADIVNGGKGDFPLMMDGESLVPLLNSNNKPKWRSDFLVEYQGEGKDSPPPGCSPTWRGV
SQCFPGCVCEDAYNNTYSCVRTLQPQHKVDLMYCEFTDTETFVELYNHTIDPHQLNNIKD
TVDPTVLVKMNKRLIMLGLCSGKTCREQSYIDYSAIPTTKHWFVDALSRFWQHTQTLFNP
YVSPL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacttctatttattgcgttatttggatgcatatgcaccgttgaagctcagttg
gtgatgtcgaaagcttccccaccaccaaatattgtgttcattctcacagatgatcaagat
acgttgcttggtggaatggacccattggtaaaagtaaagaaacttcttcaagatgaagga
accactttcaccaatatgtttaccagcaccccactttgctgcccaagcagggccagtata
ttaactggcagatactctcacaaccatgagacactgaacaatactatcagtggcaattgt
agcagcctatattggcagaaaacatttgaaacacaaactcttgctgtcgctgcacagaaa
gcaaattaccgaactttttttgctgggaaatatttaaatcagtacggaggaaagtcagtt
ggaggtccccagcatgtacctgtaggctggaatcaatggtttggattggttgggaattca
aagtattacaattacactatatctgataatggggttcctgtacaacatggagcgaactat
catgaggattatctcactgatctgctggccaacaggtctgtagatttcatccataaccat
aagatgcgatatacccaacctttcttcatgatgatttccactcctgctcctcacagtcca
tgggattctgcacctcaatattcaaagatgtacgagaacaatacagccccgcatacacca
agttataacactaaagcagttaacaagcattggttggtacgacaagccacccacccgatg
accaaagaatccatggattattcagacaatgcctttagaagtcgatggcgtgcgttaaag
tcagttgacgatttagttgaacgagttattaacgccttatcaaagatgaaacaactcgat
aatacttatgtgtttttctcatctgataacggatatcatttaggtcaattcagtctccct
atagacaaacgtcaattatatgagtttgatttacgggtcccacttatcattcgtgggcca
ggggtctcaaagaatgtgacccgtagcgaacccattgtgaacgttgacattgcccccact
gtggcggacattgtaaatgggggtaaaggggatttccccttgatgatggatggggaatcc
ctcgttccgttactgaatagcaacaacaaacctaaatggagaagcgacttccttgttgaa
tatcaaggtgagggaaaggattcaccacctcctgggtgttcccctacatggagaggggtt
tcacaatgcttccctggttgtgtgtgtgaggatgcttacaataacacatatagctgtgta
aggacattacaaccacaacataaagtagatcttatgtattgtgagttcactgatactgag
acgtttgttgagttgtataatcatacaattgacccacatcagcttaataatatcaaggat
actgtggaccccacagtcttggtcaaaatgaacaagaggttaattatgctcgggctatgc
agtggtaaaacatgcagggaacaaagttacatcgattattctgccatacccaccacaaag
cactggtttgtggacgctttaagtcgattttggcaacatacgcaaactttgtttaaccct
tatgttagtcctttatga
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