Ciona intestinalis (yellow sea squirt): 100187082
Help
Entry
100187082 CDS
T01056
Name
(RefSeq) alanine--tRNA ligase, mitochondrial-like
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100187082
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100187082
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100187082
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
100187082
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
100187082
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100187082
Prokaryotic type
100187082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
Motif
Other DBs
NCBI-GeneID:
100187082
NCBI-ProteinID:
XP_002127690
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MLLTRFGYRLNRSHFPCTVLTSKLHNYSSKELRDIFINFFERRDHKFIPSSKVYTPEDPS
LLFVNAGMNQFKPVLLGEQKKKSLFTNVRRAVNSQKCIRAGGKHNDLNDVGHDLTHHTFF
EMLGSWSFGDYFKEDACKMAWLLLTEVLNLSPDRLYVTYFNGCPLNNLKPDYDTREIWKS
IGVNHNRILPFGSTDNFWEMGETGPCGPCTEIHYDRIGNRHVPEQVNKSLSDVVEIWNIV
FMQFNKVSISQLEPLNVCHVDSGMGLERITAVMQQKQSNYDTDLFVPILSAIEEISKVGP
YKGRVGEEDTNGIDAAYRMISDHIRMLTVAISDGIYPGPKGRELILRKVLRRAVLAGIEK
LQTPRPFLYTLLPTVVESLGCAFPEVELKQDEVMEVIKESEMAFYRTLDRGDLIVRKTIK
NLAGNEFPPEVAHKLRLQNGYPLNRMLLFLSQEKLNFNMMAVDSFKKQSSEKNLNKKSFS
FLDNEEDRSSLIHSFLKQKFKPTVCVNSAKRLGDHQFTIAPVSAKLCGIVNDEGVMHTEL
NLLKGNVENLFLLLDKTNLSQPFHGKFSNIGTIYLHGRAFPVVNVINLDGWFLHEITTTD
LNVDFLQLCSGNLVTVEQNEEYELTLIRTHSAKQMLKDTCRKIIPNHAILKLKVSLDQLN
IELAGNVEDELIRQLENQFKTEGIDDRRTLDHVVGNTPGVMNFVITKCRRQGKAKTILTC
VVGKKASNALDLCSQIKSVVEDLKTQCENIDEHTSAEVLIKKIGDATFALNNSEIPYQRK
NSMREILRKLSGRMNTMQKKIKRKKESIL
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttacccggtttggatacagacttaatagatcgcatttcccctgcactgtactg
acttcaaaattacataactattcctccaaagaactacgagacatttttatcaattttttt
gaaagaagagatcataaatttattccttcatcaaaagtttacacacctgaagatccttca
cttctatttgtcaatgctggaatgaaccagtttaaaccagtactacttggagaacagaag
aaaaaaagtttgtttaccaatgttagacgtgcagtaaatagtcaaaagtgtattcgtgct
ggaggaaaacacaacgatttaaatgatgttggccacgatttaacacaccacacatttttt
gaaatgcttggatcctggtcatttggtgattactttaaggaagatgcatgtaagatggcc
tggttattgttaactgaggtgttaaatctttcaccagataggttgtatgtgacatatttc
aacggttgtccgcttaacaatttaaaaccagattatgacacccgagaaatttggaagtca
attggtgtgaaccacaatagaattttaccatttggatccacggataatttctgggagatg
ggtgagactggaccatgtgggccttgtacggaaatccattacgacaggattgggaatcga
catgtacctgagcaagttaacaaatcgctttcggatgttgttgaaatttggaatatagtt
tttatgcaatttaataaggtttctataagtcagttggagcctttaaatgtttgccatgtt
gattctggaatgggattggaaaggatcactgccgtcatgcaacagaaacagtcaaactat
gacacagacttatttgtacccattttatcagcaattgaggaaatttccaaagtgggtcct
tataaaggaagagtgggagaggaagatacaaatggtatagatgcagcataccgaatgatc
agtgatcatattcggatgttgactgttgcaatttcagatggaatctatcctggacctaag
gggcgagaacttattcttcggaaagttttgagaagagctgttttagctgggattgaaaag
ctgcaaaccccaagaccttttctttacactttgttgcctactgtggttgaatcgttaggc
tgcgctttcccagaagttgaattgaagcaggatgaagttatggaagttattaaagagtca
gagatggctttttacagaacattggatcggggtgacttgattgtcaggaaaactataaag
aacttggcaggaaatgagttcccgccagaagttgctcataaactaagattacaaaatggt
tatccactcaatcgcatgttgctattcctcagtcaggaaaagctaaattttaatatgatg
gctgtagattcatttaaaaaacaatcaagtgagaaaaacttgaacaagaaatcatttagt
tttcttgataatgaagaagataggtcaagtttaattcatagtttcttaaaacagaaattt
aaaccaacagtttgtgttaattctgcaaaacgattaggtgatcatcaatttaccattgcc
cctgtttcagcaaagctttgtggtattgtaaatgatgaaggtgttatgcatacagaactc
aatctgttaaagggtaatgttgaaaacttatttttgctgctggataaaacaaatcttagt
cagccatttcatggaaaattctccaatattggtaccatatatttacatggacgtgctttc
cctgttgttaatgttattaacttagatggttggtttctgcatgaaattacaacaacggat
ttgaatgttgattttcttcagctctgttcaggtaatttggttactgtcgaacaaaatgaa
gaatatgaacttacgctgattcgaactcattctgcaaagcaaatgctaaaagatacatgc
agaaagattattccgaatcatgcaattttaaaacttaaagtcagtttggatcagttaaat
atagaactggctgggaatgtggaagacgaattaatacgtcaactggaaaatcaatttaaa
actgaaggtattgatgaccggcggactttggatcatgttgtgggaaatacaccaggtgtt
atgaattttgtcatcacaaaatgtagaagacaaggaaaagcaaaaacaattttaacttgt
gtggttgggaagaaggcatctaatgcattagatctgtgttcacaaattaaatctgtggtt
gaagatttaaaaactcaatgtgaaaatattgatgagcacacatccgctgaagttttaatt
aagaagataggagatgcaacttttgcattaaacaatagtgaaataccatatcaaagaaaa
aactcaatgcgagaaattttgagaaaattgtcgggtagaatgaacacaatgcaaaaaaaa
attaaacgcaaaaaagaaagtatactgtaa
DBGET
integrated database retrieval system
