Ciona intestinalis (yellow sea squirt): 100187112
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Entry
100187112 CDS
T01056
Name
(RefSeq) rRNA methyltransferase 1, mitochondrial isoform X1
KO
K15507
21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100187112
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
Other ribosome biogenesis factors
100187112
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GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Methyltrn_RNA_4
Motif
Other DBs
NCBI-GeneID:
100187112
NCBI-ProteinID:
XP_026690598
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All DBs
Position
6:830879..835209
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AA seq
326 aa
AA seq
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MSSCFIRSSSLISSCRHILRKYGKDSKPIKISKQKRKTNLNHNTKARHQRFDKIETSDFG
NEFLYGRSVCNLALLSSRRPIFKMFINSKWEVQEPEDPRVQTSLKEAEERNIPIEFVSVS
DLFEITQGFPHQGICLEVGQLPVIPLTQDTITSLIHHKLEQCPVWVLLYDIIDPMNVGNI
LRTCHFLGVHAVIMTPQCAPLSSSACKASSGATEIMQIYSVRKPTQFIQDMSEKNWEILG
TDIFREDNNTHCPVLDVVEHKVTKPSLLILGSEGSGIPSDVKEICTKLLTIKPLKTNTEN
PQLSVPCLNVSAATAIILHQILLNRR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttgttttattcgaagttcttcactcatttcatcttgtcgtcacatactaaga
aaatatggaaaagattcaaaaccaattaaaatttctaaacaaaagagaaaaacgaatctg
aaccataatacaaaggcaagacaccaacgttttgataaaattgaaacttcagattttgga
aatgaatttctttatgggcgatctgtttgtaaccttgcgctgttgtcttcccgaagacca
atttttaaaatgtttattaattcaaaatgggaagtccaagaaccagaggatcccagggtt
caaacctcactgaaggaagctgaggaaaggaatattccaattgagtttgtttctgtttca
gatttgtttgaaataacgcaggggtttccacaccagggcatatgtcttgaagttgggcaa
ttacctgttatcccattaacacaagatactataaccagtttaatacatcataagttggaa
caatgtccagtatgggttcttctatatgacataattgacccgatgaacgttggaaatatt
ttgcggacttgtcattttcttggtgtacatgctgttattatgacgcctcaatgtgcccct
ctatcttcgagtgcatgtaaagctagcagtggtgctacagaaataatgcaaatatattct
gtgagaaaaccaacgcaatttatacaggatatgtcagagaaaaattgggagatattgggc
acagatatttttcgcgaggataataatactcactgccctgtattggatgttgttgaacac
aaagttacaaaaccatctttgcttattctaggtagtgaagggtctggtataccttctgat
gtaaaagaaatttgcaccaaattgttgacgatcaaacctttaaaaacaaacactgaaaat
cctcaactgtcagtaccttgtttgaatgtgtctgcagcaacagcgattatattgcatcaa
atattgctcaacagaagatag
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