Ciona intestinalis (yellow sea squirt): 100187162
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Entry
100187162 CDS
T01056
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100187162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cin03051
]
100187162
Proteasome [BR:
cin03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
100187162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
PRS7_OB
AAA_22
AAA_2
AAA_5
RuvB_N
nSTAND3
AAA_7
DUF815
AAA_14
Prot_ATP_ID_OB_N
TIP49
NPHP3_N
RNA_helicase
Mg_chelatase
AAA_24
AAA_33
AAA_18
AAA_11
AAA_3
bpMoxR
DUF5906
AAA_28
TsaE
NACHT
Motif
Other DBs
NCBI-GeneID:
100187162
NCBI-ProteinID:
XP_002129627
Ensembl:
ENSCING00000009539
LinkDB
All DBs
Position
3:2293762..2299409
Genome browser
AA seq
388 aa
AA seq
DB search
MDAREKVLTDYRKKLLEHKEIDGRLKGLREDLKKKTKDYDKSENDLKALQSVGQIVGEIL
KQLTEEKFIVKATNGPRYVVGCRRQVDKSKLKSGTRVALDMTTLTIMRYLPREVDPLVYN
MSHEDPGDVKYSSIGGLSEQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKT
LLARAVSSQLDANFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR
RFSEGTSADREIQRTLMELLNQMDGFDTLGQVKMIMATNRPDTLDPALLRPGRLDRKIRI
DLPNEQGRMDILKIHAAPITKHGEIDYEAVVKLSDQFNGADLRNVCTEAGLFAIRAEREY
VIQEDFMKAVRKVSDNKKLESKFDYKPI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcgtgaaaaagtattaacagattatcgtaaaaaactgcttgaacacaaagaa
atagacggacgattaaaaggcctaagagaagacttaaagaagaaaacgaaggattatgac
aagtcggaaaatgatttaaaggcactgcaaagtgttggtcaaattgttggagaaatttta
aaacaactgactgaagaaaaatttattgtaaaagcaacaaatggtccacgttatgttgtt
gggtgccgaagacaggtcgataaatcaaaacttaaatctggaaccagggttgctcttgat
atgaccacccttactataatgagatatttaccaagagaggttgatcctcttgtgtacaac
atgtcccatgaagatccaggtgatgttaaatattcaagcattggaggtttatctgaacaa
ataagagaactaagagaggtcattgaacttccactgctgaatccagaattatttcttcgt
gttggcatcactccccctaaaggttgtttactgtatggtccacctggcactggcaagaca
ctgttggctcgtgcagtgtcaagtcagttagatgcaaatttcttgaaggttgtgtcctca
tctattgttgacaaatacatcggagaatctgctcgtttaatccgtgagatgttcaactat
gcacgtgatcaccaaccgtgcatcatattcatggatgagattgatgcaattggaggaagg
aggttctcggagggcacgagcgctgatcgtgaaatccaacgtactctcatggagttgctc
aaccagatggatgggtttgatactcttggtcaggttaagatgatcatggctaccaaccga
ccggacacattagatccagccttactaagacctggtcgtcttgacagaaagattagaatt
gatcttcctaatgaacagggtcgcatggacatactgaaaattcacgctgctccgatcacc
aagcatggtgagattgactatgaggcggtcgtcaaactatccgatcaatttaacggcgcc
gatctacgtaacgtgtgcacggaagcagggctctttgctattcgggcagagcgagaatat
gtgatacaagaagacttcatgaaggctgtacgcaaagttagcgacaacaagaaattggag
tcgaaattcgactataaaccgatatga
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