Ciona intestinalis (yellow sea squirt): 100187210
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Entry
100187210 CDS
T01056
Name
(RefSeq) heat shock cognate 71 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03040
Spliceosome
cin04141
Protein processing in endoplasmic reticulum
cin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100187210
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100187210
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100187210
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100187210
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100187210
03009 Ribosome biogenesis [BR:
cin03009
]
100187210
03110 Chaperones and folding catalysts [BR:
cin03110
]
100187210
04131 Membrane trafficking [BR:
cin04131
]
100187210
03051 Proteasome [BR:
cin03051
]
100187210
03029 Mitochondrial biogenesis [BR:
cin03029
]
100187210
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100187210
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
100187210
Spliceosome [BR:
cin03041
]
Complex B
Other components
Prp19 complex
100187210
Complex C
Prp19-CDC5 complex
100187210
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100187210
Chaperones and folding catalysts [BR:
cin03110
]
Heat shock proteins
HSP70 / DNAK
100187210
Membrane trafficking [BR:
cin04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
100187210
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
100187210
Proteasome [BR:
cin03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
100187210
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
100187210
Exosome [BR:
cin04147
]
Exosomal proteins
Proteins found in most exosomes
100187210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Hydantoinase_A
PIN-TPR-GreABC
Motif
Other DBs
NCBI-GeneID:
100187210
NCBI-ProteinID:
XP_002129101
Ensembl:
ENSCING00000009665
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
MNPTNTVFDAKRLIGRRFNDSTVQSDIKHWPFTVANDNTKPKVKVDYKGETKTFFPEEIS
SMVLLRMKETAEAYLGKTITDAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA
IAYGLDKKVGAERNVLIFDLGGGTFDVSVLTIEDGIFEVKSTAGNTHLGGEDFDNRMVNH
FVTEFKRKHKKDITTNKRALRRLRTASERAKRTLSSSAQASIEIDSLFEGIDFYTSITRA
RFEELNSDLFRDTLEPVEKALRDAKMGKDQIHDIVLVGGSTRIPKIQKMLKDFFNGKELN
KSINPDEAVAYGAAVQAAILSGDKSEEVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTV
PTKQSQIFTTYSDNQPGVLIQVYEGERTMTKDNNILGKFELSGIPPAPRGVPQIEVTFDI
DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVNEAEKYKEEDEKQKEKIQAKN
GLESYAFNLKSTVEDDKVKDKISDEDKSAILNKAKEVLDWLENNQTAEKDEYEFQQKELE
KIANPIMTKLYQAGGGAGAGGPGGMPGGMPGGMPGGFPGGAGGPPPPSSGAGGPTIEEVD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagggccagcagttggtatcgatcttggcacaacctattcttgcgttggtgta
tttcaacatggaaaagttgaaattattgccaatgatcaaggcaaccgtaccacgcccagt
tacgtggcgtttacagatacggagaggttgattggtgatgctgctaaaaaccaggtcgcc
atgaatccaacaaacactgtgtttgacgccaagcgtttgattggtcgtcgcttcaatgac
tcaactgtacaatcagatataaaacattggcctttcacagttgccaatgacaacactaaa
ccaaaagttaaagttgattacaaaggtgaaactaaaactttcttcccggaagaaattagt
tccatggttcttcttcgaatgaaagaaaccgctgaagcatatctcggtaaaacaatcacc
gatgcagtggttacagtacctgcttatttcaacgattcacaaagacaagccaccaaagat
gcaggaaccatttctggtctcaatgttcttagaattatcaatgagccaactgcagctgcc
attgcatatggtttagacaaaaaggttggtgctgagcgaaatgttctgatctttgatttg
ggtggtggcacctttgatgtgagcgtgttgacgatagaagatggaatatttgaagtgaaa
tctactgctggaaatactcatttgggaggtgaagattttgacaacagaatggtgaaccat
tttgttaccgagttcaaacgtaaacacaaaaaagacatcaccaccaacaagagagcactt
cgtagactgcgaactgctagtgagagagctaagagaacactttcttcatctgctcaagct
agtattgagattgattctctttttgagggaattgatttttacacttcaatcacgagggct
cgatttgaagaactgaactccgatctcttccgtgacacccttgaacctgtcgagaaggct
cttcgtgacgctaagatgggaaaagatcaaattcacgacatcgttttggttggtggctcc
actcgtattcccaagatccaaaaaatgttgaaagatttcttcaatggaaaggaattgaac
aaatctatcaacccagatgaagctgtcgcttatggtgcagccgttcaggcagctattctt
agtggagataaatcggaagaggttcaggatcttctcttgttggatgttgcacctttatct
cttggtattgagaccgctggaggagtgatgacagctttgatcaagagaaacactactgtc
ccaaccaaacaatcccaaatattcaccacttactcggacaaccaaccaggtgtgttgatc
caagtgtacgagggtgaacgtacgatgaccaaggacaacaacatacttggtaagttcgag
ctctccggcatcccccctgcacctcgtggagttccacagattgaggtgacattcgatatc
gatgctaacggtatcttgaatgtatctgctgttgacaagagcactggaaaggagaataag
atcacaatcaccaacgacaaaggtcgtcttagcaaggaagatattgagcggatggtgaac
gaggccgagaaatataaggaagaagatgagaagcagaaggagaagattcaagcgaagaac
ggtctcgaatcttatgcgttcaaccttaaatcaacggtggaagatgacaaagtgaaagat
aaaatttcagacgaagataaatcagcgattcttaacaaagctaaagaagttttggactgg
ttggaaaataaccagactgccgaaaaggacgaatatgaattccaacaaaaagaacttgag
aaaattgccaaccctattatgacaaaactttaccaagctggaggtggagctggagcagga
ggacccggtggtatgccaggtggaatgcctgggggtatgccaggtggtttccccgggggt
gcaggaggacccccaccccccagcagtggagctggtggcccaaccatcgaagaggttgat
taa
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