Ciona intestinalis (yellow sea squirt): 100187212
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Entry
100187212 CDS
T01056
Name
(RefSeq) exportin-6
KO
K25204
exportin-6
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100187212
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Gene cluster
GFIT
Motif
Pfam:
Xpo1
IBN_N
PLN_propep
Motif
Other DBs
NCBI-GeneID:
100187212
NCBI-ProteinID:
XP_018668819
Ensembl:
ENSCING00000006884
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All DBs
Position
9:2849123..2869548
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AA seq
1119 aa
AA seq
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MANLEEISVGLERLMTEFFHISTGNKRKREIEEQLNKFGNQNGSWKHCLEIFTKTGNEYV
MMYCLSVLENLVNKMWLGCDPNTKGEIRRSLNHILLVQHKKVPMFITNKLVKVIVDIGRS
DWPMFYPDFFSGLLQLASSSGGSNTRALGLIALRIASEELASPREDVSGQRKEELRKLLL
QQVPDMIAIITESLRIEWEANFRQFSHVNKATPPPSPGSGESNLFDLFVFQGDSLPHITT
VNIPPHSLSIMTHALECLCQLFSWIPLSTSITPDLLSVVFRYARLGTSDSLQNSSSGLTL
SELGCKAMMCVNELMSKNCVPHNFEEYLVRIFRQTFHLLQQLTRGDNPRESLDKLDDNYL
EKFIEFLRLFVSLHFSRIASNQSFPLLQFLTLLFKFTFHQTSHEHYINCLDIWEIFVDYV
TNTAEKSKEDKEYVLTRYREGMVLFSTSILQHIQFRFNANHLTELDDGTMDDNGHTEWEM
YLIENIELIAKIGKLFPNETISLLYPILEETASLYIETNWSMVSTLDVNQLPRLQRSMRD
LAMCLQAFGRISELFLAENFQEHFQTALTLIQKFLTIALFGCKNHLYQSSNLPPAVVKDA
TAVQAEALACLQPYTHWLSQLYSEAQHAGHSQAQLSQLLSSYMDVIVPVLSKQVPDKISL
SSAHTLLSVVTTVRATFLSQSPAIQKLYHDVANGLCNKLPMKTQSLIYRSLSSLLLFPWP
NTPEAEQSWHERSENHKTFIKSLLGEYMSLSNNLSALQTDHNLYERAKPVILRAVLILDG
VVEAVADEASKSRQLCHSSIEQCITISLQLFPIYISHPDTVEVLMSLFLRIFSALRRQIG
PDSIARTLQSFLTTFTPERLQETILHENAAGVRVVEKFIEILELVIDETGNAFKTFTPSI
IVFAVQQIYPIVSQRESSDVKGPLFHLLSHVLSRRHRYFFPSPVLASMLQDGSVNSSKSG
TIAHKQQFLAIMTAFGQSFLQSDINIFKQVLDTLEDLNSKQKLYEKLYFMLSEEGVLFQF
VNVLIQALLNKTHNLLQEEICTAVFNMSSVDLDYFHSNFLQQFLQHAEGVTADQKHSLYS
AFKPERDAPSFTSRLLLFVNDLRFFKLSNSSLPEGTVQF
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttggaagaaatttcagtcggattggaaagattgatgacagagttcttccac
atttcaacaggcaacaaacgaaaacgagaaatagaggaacaattgaacaaatttggaaac
cagaatggatcgtggaaacactgtcttgaaatattcaccaagactggaaatgaatacgtt
atgatgtattgtttgtctgtacttgagaatttggtgaataaaatgtggttgggctgcgat
ccaaatacaaagggggaaatccgaagaagtttaaatcacattcttcttgtacaacacaaa
aaagttccaatgtttatcacaaacaaactcgtcaaagtcatcgttgacatcggaagatca
gattggccgatgttttatcccgactttttctccggactcctccagcttgcatcctcttca
ggaggaagcaacactcgtgctctgggacttattgctctcaggatcgcatcggaggaactc
gcatcacctcgggaggatgtttctggtcaaaggaaggaagaattgaggaaacttctcctc
cagcaggtcccggacatgatcgccatcatcacagaatcccttcgtattgaatgggaagca
aacttcaggcaattctctcacgtcaacaaagccacgcctcccccttccccaggatccggg
gaatcaaatctatttgatttgtttgtattccaaggagattcccttccccatataaccaca
gtaaacattccaccacattcactcagtattatgacacacgcactagagtgcttatgccaa
ttgttcagctggattcctctttctaccagcatcactccagatttactgagtgttgtgttt
agatatgcaagacttggtacaagtgattccttgcaaaactcttccagtggattaacatta
tcagagttgggttgcaaagcaatgatgtgtgttaatgaactgatgtcaaagaactgtgtt
cctcataactttgaagaatatttagttaggatttttcgtcaaacatttcacctactgcag
caacttacccggggtgacaacccaagagaatccctcgataaattggatgacaattatttg
gagaaatttattgaattccttcgtctgtttgtaagcctacacttctcaaggatcgcctca
aaccaaagttttcctctcctacagtttcttactcttttgtttaaattcacgttccaccag
acttcacacgagcattacatcaactgcttggatatctgggagatatttgtggattacgta
acgaatactgcagagaaaagtaaagaagacaaagaatatgttttgacaaggtacagggaa
ggtatggtgttgttttccacttctatacttcaacatatacagtttcgattcaatgcaaac
catttaactgaactggatgatggaactatggacgataatggccacacagaatgggaaatg
tacttgattgaaaacattgaacttattgcgaaaattggaaaattatttcctaatgaaaca
atctctttattgtacccaatattagaggaaacggcatctttgtacattgaaaccaactgg
tccatggtttcaacattagatgtgaatcaactaccaaggttacaaaggtctatgagggac
ctcgctatgtgcttgcaagcgtttggccgaatatctgaattgtttctcgctgagaatttc
caggaacattttcaaaccgcgttaacattgatacagaaatttctaaccattgctttattt
ggttgtaagaatcatttatatcaatcatccaatctccctcctgctgttgtgaaagatgct
actgcggtacaagcagaggcgctcgcttgcttacaaccctacacacactggttgtcccag
ttatacagtgaagcacaacatgctgggcattcacaagctcaactatcccaactgctcagt
agttacatggatgttattgtgccggtgttaagcaaacaggtaccggacaaaatcagttta
tcatcagcacacaccttgctttcggtggttaccacagtgagagcaacattcctttcacaa
tcacctgcgatacaaaaactttaccatgatgtcgcgaatggcttgtgcaataaacttcca
atgaagacgcaaagcctgatatacagatccctgtcaagcctcctgttgtttccatggccc
aacacaccagaagctgaacaaagctggcacgaacgtagtgaaaatcataaaacttttatt
aaatccctgcttggcgaatatatgtccctctccaacaacttatctgctttacaaactgat
cataatttatatgagagagcaaaaccagtgatactccgtgcagttttaatattggatggt
gtggttgaagctgtagcagatgaagcttcaaaatctcgtcaactttgtcattcatccatc
gaacaatgtatcaccatttcactgcagttgtttcctatttatatttcgcatccagacaca
gtggaagtcctgatgtcacttttccttcgaatattttctgccttacgtcgtcagatcggg
cccgactcgatagcgaggacccttcaatcgtttctcactacttttacgcctgaacgatta
caggagacgatccttcatgagaacgcagctggtgtgcgggtcgtggaaaaattcatagaa
attcttgaactggtaatcgatgagacgggaaatgcgttcaaaacattcacaccaagtatt
attgtgtttgctgtgcaacaaatatatcctatagttagccagcgcgaatcctcggatgtc
aagggacctctcttccatctgctgagtcatgttttatcgcgtcgtcatcgatatttcttc
ccgagtcccgtgttagcatcaatgcttcaagatggatcagtgaattcaagcaaaagtgga
actattgcccataaacagcaatttcttgccatcatgacggcatttggtcaatcgttctta
caatctgatatcaacatttttaaacaagtgcttgacacgttggaagatcttaactccaag
cagaagttatacgagaagttgtatttcatgttatctgaagaaggagttttattccagttt
gtcaacgtgttaatacaagctttacttaacaagactcataacctactacaggaagaaata
tgcactgcagtgttcaacatgtccagtgttgacctggattattttcattccaactttctg
caacaattcctacagcatgccgagggtgtgactgctgaccaaaaacattctctctacagt
gcgtttaaacctgaaagggacgcgccatcatttacaagtcgacttcttttatttgtcaac
gatttacggtttttcaaactttccaattcaagtttacccgaaggaactgttcagttttag
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