Ciona intestinalis (yellow sea squirt): 100187231
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Entry
100187231 CDS
T01056
Name
(RefSeq) synaptonemal complex protein 3-like
KO
K19528
synaptonemal complex protein 3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100187231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100187231
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100187231
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Meiosis-specific proteins
Synaptonemal complex
100187231
Cilium and associated proteins [BR:
cin03037
]
Motile cilia and associated proteins
Sperm associated proteins
100187231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cor1
Peptidase_C65
CCDC138_cc
AsnC_trans_reg_3
Mating_N
YgaB
Motif
Other DBs
NCBI-GeneID:
100187231
NCBI-ProteinID:
XP_002125203
Ensembl:
ENSCING00000009534
UniProt:
F6UXC1
LinkDB
All DBs
Position
3:2260470..2268482
Genome browser
AA seq
230 aa
AA seq
DB search
MPRKSKESKPTFEYEQDFMEGMESGSEPKEAIICEVKQPKKPKKRSSVEYEREESDYEED
EQPVASILNQFGSDIKKSISSKRRKLEAFTKQCCAAREKLDSVLENQKKDRSTLNEEYKK
QISSVINQWETDIDKAKENEEKLNNLLTQQMKLITQVRVVQTQRFKSIKQLHDQYIKSVG
TVNETHSQQHKDVNKEIDKELSNLQKKYLLESRNQEMATMRKSLHSMLYQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcctagaaaatctaaagaatccaaaccaacatttgaatatgaacaggacttcatggaa
ggaatggaatcaggatccgaacctaaagaagcaatcatttgtgaagtaaaacagcctaaa
aagccaaagaagcgatcatcggttgaatatgaaagagaggaatcggattatgaagaggat
gaacaacctgttgcatctattctcaatcagtttggttctgatataaaaaagagtatcagt
tcaaagcgtagaaagttggaagcttttacaaaacagtgttgtgcagccagggagaagttg
gatagtgtattggaaaatcagaaaaaagatcgttctactttaaatgaggaatataagaag
cagatatcatctgttattaaccaatgggagacagatattgataaagcaaaagagaatgaa
gaaaaactaaataatcttcttactcagcaaatgaaactgataacacaagtgagagttgtt
caaacacagaggttcaagtcaattaaacagctacatgatcagtacataaaaagtgttggc
acggttaatgaaacccactctcaacaacataaggatgtcaataaggaaatagacaaggag
ttgtccaacttgcagaaaaaatatttattggaatcgagaaatcaagaaatggcaacaatg
cgaaaatctcttcattccatgctatatcagtga
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