Ciona intestinalis (yellow sea squirt): 100187349
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Entry
100187349 CDS
T01056
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03015
mRNA surveillance pathway
cin04350
TGF-beta signaling pathway
cin04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100187349
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100187349
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100187349
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100187349
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100187349
03036 Chromosome and associated proteins [BR:
cin03036
]
100187349
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100187349
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100187349
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100187349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
HEAT
HEAT_2
HEAT_EF3_N
Adaptin_N
Vac14_Fab1_bd
HEAT_EZ
Htt_N-HEAT_1
Cnd1
CLASP_N
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
100187349
NCBI-ProteinID:
XP_002119919
LinkDB
All DBs
Position
1:complement(7585064..7587641)
Genome browser
AA seq
587 aa
AA seq
DB search
MAEEAGDDSLYPIAVLIDELRNEDVQLQLNSMRKLSTIALALGVERTRSELIPFLTDSMC
DEDEVLLALAEQLGSFTPLVGGNSFAHCLLPPLESLSTVEETVVRDKAVDSLRSVANDHS
ANDLEAYMIPLIKRLATGDWFTSRTSACGLFSVVYPRVSSALKQELRTMFRNLCGDDTPM
VRRAAASKLGEFAKVVEREQVTSDLIPLLHNLASDEQDSVRLLSVDGCVTMADLLNESEC
EQYLLGTIREAAADKSWRVRYMLADKFTLLQKAVGPQLTHQHLVPAFQALLKDCEAEVRA
AVAYKVKSFCENLQVDKREQVIMNSILPHVKELVTDANQHVKSALASVIMGLSPVLGKDN
TIEHLLPLFLTQLKDECPDVRLNIISNIDCVNEVIGIDQLSQSLLPAIVELAEDGKWRVR
LAIIEHMPLLAAQLGQQFFDDKLNELCMQWLVDHVFAIREAATTNLRKLVEAFGVNWAKD
TVVPKILNLAQDQNYLRRMTTIFCVNELATALSGELLTKLILPTIIRLSTDNVANVRFNV
CKCMERVGLQLDGTSLSTEVKPMLQRLTHDKDVDVQFFAQRALQTLA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaagctggagatgactctctgtacccgattgcggtcctaattgacgaatta
cgtaatgaagacgtccaactacaattaaatagtatgcggaagctatctacaatagcactg
gcacttggagttgaaagaacaagatcggagctcatcccattccttacagactccatgtgc
gacgaagatgaagtgttgcttgctctggccgaacaactcggttcattcacaccgcttgtt
ggcggtaacagcttcgcccattgcttactcccaccactagagagtctttctacagttgaa
gaaaccgtagtaagagataaagctgttgattctctccgttctgttgctaatgatcatagt
gcaaatgatttggaagcttacatgatcccattaataaagcgtttagcaactggtgattgg
tttacatctcgtacctctgcgtgtgggctgtttagcgtcgtctaccctcgtgtgtctagc
gccctcaagcaagagttacgcaccatgttccggaatctttgcggcgacgacactccaatg
gtccgacgggcagctgcttcaaaacttggagagttcgccaaagttgttgagcgtgaacaa
gtcacttcagatttaattccactcctgcataacttggcaagcgatgaacaagactcagtg
aggttgctttctgtggatgggtgtgttacaatggctgacttgctcaacgaaagtgaatgt
gagcagtatcttcttggtacaatccgtgaagcagcagcagacaagtcctggcgagtgaga
tatatgctggctgataaattcaccttgttacaaaaagcagttggtcctcaactgacacac
caacatttggtcccagctttccaggctttactcaaagattgtgaggctgaagtgcgtgct
gctgtcgcttacaaagtgaaatctttctgtgagaaccttcaagttgataagagagaacag
gtgatcatgaacagcatacttcctcatgtaaaggagcttgtcactgatgcaaatcagcac
gtgaagtctgctcttgcttcagtcatcatgggcctgtctccagtgcttggtaaagacaac
acgattgagcatcttcttccactcttcctcactcaattgaaggatgaatgtccagatgtt
cgtctgaacatcatttccaacatcgactgcgtgaacgaggtcatcggaatcgaccagtta
tctcaatccctgcttccagctatcgtggaacttgcagaggatggaaaatggagagttcgc
ctcgcgattatcgagcacatgcctcttcttgcagcacaattgggccagcagttctttgac
gacaaattgaatgagctttgcatgcagtggttggttgatcatgtgtttgcaatccgagaa
gccgcgaccacgaacctgagaaaacttgttgaagcttttggagtgaattgggctaaagac
acagttgtgccgaaaatcctcaacttggctcaagatcaaaactatcttcgaagaatgaca
acaatcttctgtgtgaacgaattggcaactgctctttcaggggaactgttgacgaaacta
attctcccaaccattatccggctctccaccgataacgtcgctaatgtccgtttcaatgtt
tgcaaatgcatggagagagttggcttacaattagatggtacaagtctcagtactgaagtg
aaaccaatgctacaacgcctcacccatgacaaggatgttgacgtccagttctttgcacag
cgagccctacagacattggcttga
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integrated database retrieval system
