Ciona intestinalis (yellow sea squirt): 100187356 Help Entry 100187356         CDS       T01056                                  Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin03420   Nucleotide excision repair cin04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100187356   09124 Replication and repair    03420 Nucleotide excision repair     100187356  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:cin04121]     100187356    03400 DNA repair and recombination proteins [BR:cin03400]     100187356 Ubiquitin system [BR:cin04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      100187356 DNA repair and recombination proteins [BR:cin03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       100187356     TCR (transcription coupled repair) factors      Cul4-CSA complex       100187356 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st HCV_NS1 Condensin2nSMC Motif Other DBs NCBI-GeneID:  100187356 NCBI-ProteinID:  XP_026691358 Ensembl:  ENSCING00000007437 LinkDB All DBs Position 8:complement(4518292..4531029) Genome browser AA seq 1155 aa AA seqDB search MSSNYIVTAHKPTAVKQCITGNFTSGSDLNLLISKNTRLELFTVTPEGLRPVKEINIYGR IAVLKFFRPEGEDRDLLFILTERYHGCILQYKATDGGCEIITKASGDLSDTVGRPPETGI IGIIDPTSKLIGLRLYEGVFKFLPYDPTSEELRPFNIRIEELSVIDAKFLHGYTTPTLVI IYQNSQGRHVKTYIVDVRDKEVVAGPWKQENIDAEANFIINVPKPLAGSIIIGQESITYH NGDKYIPIAPPQIKDTINCYAPVDKDGSRYLLGDLAGHLFILLLESDEMMDGTNTVRDLK IELLGEVSIPEAISYLDNGVVYIGSRLGDSQLIRLHTTPVEVQSPTDSSMEGRPKPSLIS VLDTYTNLGPIIDMCVVDLDRQGQGQVVTCSGAFKEGSLRIIRNGIGIQEHASIDLPGIK GLWPLRVFDTSRSYDTLVISFVGHSRILQLSGEEVEETDLPGFDDESQTFYCSNVCHNQL VQITEKSIRLISHTERRQVHEWKPKNDRHISVATCNKSQVLLAIGSSLHYFEIQPGEVIE RACVDLPHEVACLTIEPLVSDPSELEGPDFVTASICAVGLWNDNTARVLKLPTLEEMHQQ KLADEIIPRSILLVQFDGINYLLVTLGDGTLFYFTLNPETGYISDRKKVPLGTQPTSLSV FTSGGSRTVFACSDRPTVVYSSNKKLVFSNVNLKEVSHMCPLDSDGYPDSLALANDNTLL IGTIDEIQKLHIRTVPLYESPRRIAYQEESQCFGLVTLRTDSVDATGDKMKITRPSASTQ ASVCTKSPPVDGRSVEGFSATADIGSLLIIDQHTFEVHHAYQLDTNEEPLSIMSCKLGSD PNSYFVVGTAFVYMEETEPKHGRILVFHYIDNKLTLVAEKEVKGAVFCLCQFNGHVLAAI NTSVSIYQWTTEKELRAECSNQSNILALYLKCKGDFVLVGDLMRSMSILNYKHVEGNLDE IAKDYSPNWMTAVEILDDDNFLGAENFYNVFICQKDSGATTDEERSKLREAALFHVGDSI NTFRHGSLVMQNVGETAVSSKGHILFGTVHGSIGVITTVDEDLYAFLHSIQNRLAKVIKS VGNIDHESWRSFCTNEKTEAHRGFVDGDLIECFLDLNREKMAEVAKGLMVKEHGTKREAT VDDLIKAVEEMNRIH NT seq 3468 nt NT seq  +upstreamnt  +downstreamnt atgtcatccaactacattgttactgctcacaaaccaactgctgtaaagcaatgtattaca ggtaatttcaccagtggaagtgacttgaatttattaatttctaagaacacccgactagaa ttattcactgtcacaccagaaggcttgcgtcctgtcaaagaaatcaatatatatggcaga atagctgtgctcaaatttttcagaccagaaggtgaagatcgtgacttattgtttatatta accgagcgatatcatggatgtatattgcaatacaaagcaactgatggcggatgtgaaatt atcaccaaagcaagtggggatctcagtgatacagttggcagaccgccagaaactggaata attggaattattgacccaacaagtaaacttattggtcttcgcttgtatgaaggggttttc aagttcctaccttatgatccaacttctgaagagttacgacctttcaacataagaattgaa gaactgagtgtcattgatgctaaattcctacatggttacaccacaccaacacttgttatt atttaccagaactcccaaggtcgccatgtgaaaacatatatagttgatgtacgtgacaaa gaagtagtagctggaccgtggaaacaagaaaacatcgatgctgaagccaactttattatt aatgttcccaaacccttagctggatccataatcattggacaagaatccatcacctaccat aatggtgacaaatatattcctattgcaccacctcaaataaaggacacaatcaactgttat gctccggtagataaagatggatcaagatacctcctcggtgatcttgctggtcatctattc atccttctcctggagagtgatgagatgatggatggaacaaacacagtcagggatcttaag attgaacttcttggagaggtttcgatcccagaagcaatcagttaccttgacaatggggtg gtttatatcgggtcacgacttggagattcacaacttattcggttacatacaacacctgta gaagtgcagtcacctacagactctagcatggaaggaagacccaaaccaagtcttatcagt gtgcttgacacttataccaaccttggtcctattattgatatgtgtgtagttgatttggat agacaaggacagggtcaggtggtcacttgttctggcgcatttaaagaaggaagtctcaga attattagaaacgggatcggaatccaagaacacgcgagtattgatttgcctggaattaaa ggtttatggcctttaagagtgtttgatacttcacggagctacgatactctcgtcatctca ttcgtcggacattctcgcatcctccagttgagtggagaggaagtagaagagacagatctt cctggatttgatgatgagagccaaactttttactgctccaatgtttgccacaaccaactt gtacagatcacagagaaaagcatcaggttgatatcacacactgagagaagacaagttcat gaatggaaacctaagaatgatcgtcatataagtgttgctacatgcaataagtcacaagtg ttgcttgctattggctcatctcttcattactttgaaatacaaccaggtgaggtgatcgaa cgagcatgtgtggatttaccacacgaagttgcatgtttaactattgaacccctggtcagt gacccttcagaattggaaggtccagacttcgtcacggcctctatatgcgctgtcggttta tggaacgacaacacagctcgtgttcttaaacttccaacattagaagagatgcaccagcag aaactggccgatgaaataatcccacgttcaatacttctggtacaattcgacggtattaac tatctacttgtgactcttggtgacgggactctgttctattttactctcaatcctgaaaca ggttatatcagtgatagaaagaaagttccacttggaacacaaccaacttccctcagtgtt ttcacgtctggtggttcacgaacagtgttcgcgtgttcggatcgtcccaccgtcgtatat agttcgaataagaagctggtattttccaatgtcaatttaaaagaggtttcccatatgtgc ccgctggattcggacggttatccggacagtcttgccttggccaatgacaacaccttgttg atcgggacgatagacgaaatacagaaactgcatattcgcacagtgccgctgtatgagtca ccaagaagaatagcttaccaggaagaatctcaatgctttggccttgtcactttacgtaca gactccgtcgacgctaccggtgataagatgaaaataacaagacccagcgctagcactcag gcatcggtatgcacgaaaagtccacccgtagacggaagatccgtcgaaggtttttctgcc acagctgatataggcagtttgcttataatagaccaacatacatttgaagtccaccatgca taccagcttgacacgaacgaggaacccttaagcattatgtcatgcaaattaggatcggat cctaactcttacttcgtggtcggcactgcgttcgtttacatggaagaaactgaaccaaaa cacggccgaattctcgtctttcattatattgacaataaattaacgttggtggcggaaaaa gaggtgaaaggagccgtgttttgtctttgccagtttaacggccacgttttggctgccatt aacacgtcggtgagcatataccagtggacgacagaaaaagagttacgtgccgagtgcagc aaccaaagcaatatattggcattgtacttaaaatgcaagggcgacttcgtgttagttggc gacctcatgcgcagtatgagcatcttaaactacaagcacgtagaaggcaatctagacgag atagcgaaggattacagtccaaattggatgacggctgtcgagattttagacgacgataat ttcttaggcgccgaaaatttctacaacgtatttatctgccagaaagacagtggtgctact acagacgaagaaaggtccaagctacgagaagccgctttgtttcacgttggtgattcaata aacacttttcgtcatggttcactagtcatgcagaacgtgggggaaactgcggtttcttcg aaggggcatattctcttcggtacagtgcatgggagtataggagtgattacaacagtcgac gaagacctatacgcatttctgcattctatacagaaccggcttgccaaagtcatcaagagc gtcggaaacatagaccacgaatcatggagatcgttttgcaccaacgaaaagacggaggct caccgtgggttcgtggatggcgaccttattgaatgttttctcgatcttaacagggaaaag atggcagaagtagcaaagggtttgatggtaaaagagcatgggacgaaacgagaagcaacg gttgatgacttgataaaagcagtggaagaaatgaaccgcattcattaa

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