Ciona intestinalis (yellow sea squirt): 100187367
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Entry
100187367 CDS
T01056
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
cin04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100187367
09142 Cell motility
04814 Motor proteins
100187367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100187367
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100187367
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
100187367
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
100187367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WDR55
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_RFWD3
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
100187367
NCBI-ProteinID:
XP_009860935
Ensembl:
ENSCING00000004337
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MSDRSDRKAELERKKARLAQIRAEKQKKAPAKKEEKVSVAVSSDLDKKRKETEDLLRTVG
IDYSTTVKPTAAAPSSPKKVTDTGDGQYYRPRQPKPTKLSQSKITLTSIPPKEVVTYSKE
CQTPVETQQQDSEDETENVKDDVQEKEDKLDELSLEEEEELLESAIRELSEQERDIIETS
EDYIQFISRSSRFMDRALSHRIDLFTEYSSQVEEESEIDRGMKLSVNRIFSDERWSRHRV
VTSLDWSTHHPELCVASYGNNEEAPYEPEGVALVWNSKYKTTTPEYTFHCQSSVTAACFA
KFHPNLVVGGTYSGQIVMWDNRSNKRTAQRSKLSTAAHTHPVYCLDVVGTQNAHNLISVS
TDGKLCSWSLDMLTQPLEAMELQHKQSKSVAVMSMAFQHNNVNNFAIGAEDGSLYTACRH
GSKTGISDLYEGHNGPVSGVDFHRSPGQLDFSHLLLTSSFDWSIKLWSLKSGSRTCLHSF
QDHSDCVYDVAWSPVHPALFASGDCSGRLDLWNVNSDAEVPVVSSVIDSAPAINKLRWNG
SGSQIAIGDYMGRVHLCEVGEQLSQPRQDEWSRFVGSLTEIRNAHQEEEEARNVSRQL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagaagtgacagaaaagctgaattggaacgcaagaaggcacgcctcgctcaa
attcgagctgaaaagcagaaaaaagctccagccaagaaagaagaaaaagtctcagttgct
gtttcatctgatttagacaagaagcgaaaggaaacagaagatttgcttcgaactgttggg
atcgattattccacaacagtaaaaccaactgcagctgctccttcatctccaaagaaagtt
acagatactggagatggacaatactacagaccaaggcaaccaaaaccaacaaaactttct
caaagcaaaataactctcacttctattcctccaaaagaagtagtcacgtattctaaagaa
tgtcagactcctgtggaaacacaacagcaagattctgaagatgagactgaaaatgtgaaa
gatgatgttcaagagaaagaagacaagttggatgaactttcattagaagaagaggaagaa
ttgttggaatcagcgatccgagagctatctgagcaggagcgagacatcattgaaacatcg
gaagattacattcagttcatctcaagatcatcaagattcatggaccgagcgctctcgcat
cgaatcgatctttttactgaatacagttcacaagtggaagaagaaagtgaaatagatcga
ggaatgaaattatcggtgaatcgaatattttctgatgaacgatggtcgagacatagagtg
gttacttcattagattggagcactcatcatcctgagttatgtgttgcatcatatggtaac
aatgaggaagctccgtatgaacctgaaggagttgctctagtgtggaacagcaaatataaa
actacaactcctgagtacaccttccattgccagtcatcggtaactgctgcttgctttgct
aagtttcacccaaacttagtggttggtgggacgtacagtggacagattgtgatgtgggac
aaccgtagtaacaagcgtacagcacaacgaagcaaactttccacagcagctcatacccac
cctgtgtattgcttggatgtggttggcacacagaacgcacataacctgatatctgtatca
acagatggtaaactttgttcatggagtcttgatatgctaacacaaccactggaagcaatg
gagcttcaacacaagcaatcgaaatcagtagcagtgatgagcatggcattccaacacaat
aatgttaataactttgccattggtgctgaggacggttccttatatacagcgtgcagacat
ggaagcaaaacaggaataagcgatttatatgaaggacacaacggaccggtgtctggagtc
gatttccatcgatcacccggtcagcttgacttctcccatctattactgacttcttcattt
gattggtccatcaagctttggtctctaaaaagtggttcgcgtacctgtttacattccttc
caagaccacagtgattgcgtatatgatgttgcttggtctcccgttcaccctgctttgttt
gccagtggtgactgctctggtagattggacttgtggaacgtcaattcagacgctgaggtt
ccagttgtttcatcagtaattgattcagctcctgccatcaataagttaagatggaatgga
agtggaagccagatagccatcggtgattacatgggtcgtgtgcacctatgtgaagtggga
gagcaattatcgcaaccaagacaagacgaatggtcacgctttgttggtagtttgaccgag
atacgcaacgctcatcaggaagaagaagaagcaagaaatgtttcccgacaactatga
DBGET
integrated database retrieval system
