KEGG   Ciona intestinalis (yellow sea squirt): 100187391
Entry
100187391         CDS       T01056                                 
Name
(RefSeq) DNA repair protein complementing XP-G cells-like isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    100187391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cin03400]
    100187391
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100187391
SSDB
Motif
Pfam: XPG_N XPG_I
Other DBs
NCBI-GeneID: 100187391
NCBI-ProteinID: XP_002121987
Ensembl: ENSCING00000022981
LinkDB
Position
2:complement(2000637..2006729)
AA seq 948 aa
MGVTGLWKLLEGNGRQVELHTLEGKILAVDISIWLNMAIKGMRGQSANNAHLITLFHRIC
KLLYFGIKPVFVFDGGAPALKQRTLKERRQKKDMNIRQSKNASEKVLQNYLKRQVLQLAI
KSKDGEKVSSSSDRATDSNNETAIDTSELLPPKGKYLKPDEDIFHLPPMKEGLEMEESDE
EREEQWKQRSQTRDVVYGSAMQGDFHEMMQIDVNSDDFQSMPSDIKHELLMDIQEIRKRR
RTQLEAMPDKSDSFSNYQLSGLLAKRKLTTQIRGIENQMKREHTSANTHGYQGDVEISQI
SSDNKMHYVLLRGLKKRKAEVEKEEKYEEMNSLKSNLEFKSDSLPSFSEEIDIVKSNTES
TVSVRDDSVKTINISSDDSADLLSSNVELVENKISKKTENKISEQNDRIVESSVSPKKPK
VENSLVSPTQSLMLPIETTTKEILNSSSEFGKDNIIKEEATNNTVITQQEPTLEVEKLEK
PEIVQPSAVTNINQFVKSLTAASAEKVVGQEVICENEIAPAAKVDVSKEELLKKNEDLDE
SDDDFVEVVDRQGVVLEDEEQSVEATPITQQSLEELPPAANPWVGMQKEDINELEEKLDA
EDAALLERIKSASRAAREVSDVATMECQELLRLFGIPFVLSPQEAEAQCAFLDMNDLTMG
TITEDSDVWLFGGKNVYKDMFDRKRDPTCYSLLDIQAELGLLRSHFINIALCSGSDYTEG
LEGVGPVRALEIMKEFPGEGMESLVKFKQWWDDAHAQVKPPTSEAKIKTELRRLNVPQNF
PSKLVVEAYLKPRVNESKDKFVWGMPDLSGIRDYLTERLHWTRNKIDEELLPVLKKSAER
ATRKQTYITSFAMKTNPLPRKQTKKSKRVMRALTPLVKFEEEEESKPPKRGRKKKIDAKP
EPKTNSKVNNRKRISRKKTKPISPEPVVDLRLSESSSDIIINNDILLL
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgggagtaactggattatggaaacttttagaaggaaatggaagacaagttgaacttcat
acattggagggaaagattttagctgtagatatcagcatatggctgaacatggcaatcaag
ggaatgagaggtcaatctgccaacaatgctcatttaataacgttatttcacagaatctgt
aagttgctttactttggcattaaacctgtctttgtatttgatggtggtgcccctgcattg
aagcaacgcacattaaaagaacgtagacagaagaaagatatgaacattagacaaagtaaa
aatgcttcagagaaggttcttcaaaattacttaaagcgccaagtcttgcaacttgctatt
aaatccaaagatggggaaaaagtatcttctagttctgatagagcaacagattcaaacaat
gaaactgcgatagatacatccgaactacttccaccaaaaggaaaatatttaaagccagat
gaagatatttttcatcttcctccaatgaaggaagggttagagatggaggaatcagatgag
gagagagaggaacaatggaagcaaagatcacaaacacgagatgttgtgtatgggtcagcc
atgcagggtgacttccatgaaatgatgcagattgatgtaaactcggatgactttcaatcc
atgccatcagacatcaaacatgagcttctcatggacatccaggagattaggaagagaaga
cgaacacagctggaggcgatgccagataaatcagattccttttcgaactatcagctcagt
gggcttctggcaaaacgaaaactgaccactcagattcgtggaattgaaaatcaaatgaag
cgtgaacatacatcggcgaacacacatggctatcaaggagatgtggagataagtcagatc
agttcggacaacaagatgcactatgttctactaagaggccttaaaaagcgaaaggcagaa
gtggaaaaagaggaaaagtatgaagaaatgaattctttgaaaagtaacttggaatttaaa
tccgatagtttaccttcattcagtgaagaaatagatattgttaaatcaaacacagaaagt
acagtatctgtgcgtgatgactcagtaaaaactataaatatcagcagtgatgattcagca
gatttgctttcttcaaatgttgagttggtggaaaataaaatatctaagaaaactgaaaat
aaaatatctgagcaaaatgatcgcatagtcgaatccagtgtgtcaccaaagaaaccaaag
gtagagaattccttggtgtcaccaactcagtcattaatgttaccaatagagaccaccact
aaggaaatattgaacagttcaagtgaatttgggaaagacaacataattaaagaagaggcc
acgaataatactgtcataacacaacaggaacctacattagaagtggaaaaattagaaaaa
cctgaaattgttcaaccttctgcagttacaaatataaatcagtttgtcaaatctttaact
gctgcatctgcggaaaaagtggtcggtcaagaagttatctgtgaaaatgagattgctcct
gctgctaaagtggatgttagtaaagaagagctgctgaagaaaaatgaagatttagatgaa
agtgatgatgattttgtggaagtggtcgatagacaaggagtagtattggaagatgaagag
cagagtgtggaggcgactcctattacacaacaaagtttagaagagttgcctcctgctgct
aatccttgggttggaatgcaaaaagaagatattaatgaacttgaagagaaattggatgca
gaagatgctgctcttcttgagaggatcaaatctgcatcacgagcagcaagagaagtatca
gatgttgcaacaatggaatgtcaggagttgcttcgattgtttggaattccgtttgtcctc
agtccacaagaagctgaagcccagtgtgcgtttcttgacatgaatgatttaactatgggc
acgattactgaggattcagatgtttggttgtttggtggaaagaacgtctacaaagatatg
tttgatcgaaaacgtgatccaacatgttactcgctgcttgatatacaagcagagcttggt
cttttacgaagtcactttattaacattgctttgtgtagtggaagtgactacacagaagga
cttgaaggagtaggtccagttagagcgttggaaatcatgaaggaatttcctggagaagga
atggaaagtttggttaaatttaagcaatggtgggatgatgcacatgcacaggtgaaacca
ccaactagtgaagcgaaaatcaaaacagaacttcgtcggctgaatgttccacaaaacttc
ccgtcaaagttggttgttgaagcttacctgaaaccccgtgttaatgagtcaaaggataag
tttgtgtggggaatgccggacctcagtggtatccgtgattatcttaccgagagactacac
tggacaaggaataaaattgatgaagagttgctgccagttttaaaaaagtctgcagagagg
gcaacacggaaacaaacttatataacaagttttgcaatgaaaacgaatcctttgccgaga
aagcaaacaaaaaaaagtaaacgagtgatgcgagccctcacacctcttgtaaagtttgag
gaagaggaggagagcaaacctcccaagagaggaagaaagaagaaaattgatgcaaaaccg
gaaccaaagaccaattctaaagtgaataataggaaacgtatcagcagaaaaaaaaccaaa
cccatcagccccgaaccagttgttgacttgagattgtcggaatcttcatctgacatcatc
ataaataacgacatattattactgtga

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