Ciona intestinalis (yellow sea squirt): 100187456
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Entry
100187456 CDS
T01056
Name
(RefSeq) chondroitin sulfate glucuronyltransferase-like
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cin01100
Metabolic pathways
Module
cin_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
100187456
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100187456
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
100187456
Glycosyltransferases [BR:
cin01003
]
Glycan extension
O-Glycan
100187456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
100187456
NCBI-ProteinID:
XP_002122339
Ensembl:
ENSCING00000012039
LinkDB
All DBs
Position
7:complement(698934..709807)
Genome browser
AA seq
818 aa
AA seq
DB search
MVMRRLKFISNVRPFLPVIIGLSLGFSISIVRMPILNEDCVFVSEEHIDRKLNSIPGAKF
HPENGLPNSDFKTMSKEEAEAYRKDREYAPAVYDSLEDFEPRIITDPELKPKVDVNLEAN
KKKIVRTRYISTELGIREKLVSAVITSSDTYLSMAVAMNKTFSHHMQKVIFFNGESVAND
KAPTAPGMTLVTHPDDNPVRILSLTLKYLHLKFKSEYDWFFITTDSTYAQADRVNHIVDH
ISINRRLYLGKPMSYNDKLGVVNYCSIKSGFIISRLLLLDLAMQLDACSEDGSQASLSPD
KWLGRCIKRATSGAVECVDEEEAIFYHTFNMENSNLNFEVETTPEFEEAVTVSGVNSPQM
MFQLHKKYSQLEIDKAYKEIGEIQDEIKSLVPKLPEGERELSWPIGINPSFKPTNRWDII
VWDYFTEDYTLTCPGEVPKCDLTGVDKLDIQNILQIALDRLNEKYNPQGLILEKRKLING
YRRFDPQRGMEYILDLLLTVIMENENQEIELSHRVNMLRPLSQVEIIPMPYVTESAKVHI
ILPLTKQERVYFEAFMDKYAKVCLNNDENVALNIVFVYDPETAQRIHQDDIFAEQKQLLQ
SYEARYKKDGKEGKLIPWVSIKTEVPSQLKTMDIVAKKYPTESLFLLTSVAANMNTNFLN
RCRMNAIPGWQVFFPIPFSQYNPQIIFQNGQVPEQIDIKPSNGHFDLYSFDEVCFYNSDY
MASRTKMAATVSAEDSKESLSDLVDTLEVYDIMIKYSQLHVFRAVEPQLTRRYVHRNCNK
RNGQEIFDRCERSNAEGLASRTQLAMELFPENKEPSKT
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgagacgtcttaaattcatcagcaatgtacgaccattccttcccgttattatc
ggattatcactcgggtttagcataagcatcgttcgaatgccaatattaaacgaagactgc
gtatttgtctctgaagagcatattgataggaaacttaattccattcctggagcaaagttt
cacccggaaaatggattaccgaattccgattttaaaactatgagcaaggaagaagctgaa
gcatatagaaaagatcgggaatacgccccagcagtttacgattccttagaagattttgag
ccgcgtataatcactgatccagaactaaaaccaaaagttgatgtcaatttggaagcaaat
aagaaaaagattgtccgaacacgttacatcagtaccgaacttggaataagagaaaaactt
gtgtcagctgtcattacttcatcggacacttatcttagtatggctgtagcaatgaataag
accttcagccaccacatgcagaaagtgattttctttaacggagagagcgtagcaaatgac
aaagcaccaacagctccaggaatgacactcgtcactcaccccgatgacaacccagttcgg
atcttgtctcttacattgaaatacttacatttaaagttcaaatcagagtacgattggttc
tttattaccacggacagcacgtacgcacaagcagaccgtgttaaccacattgttgaccat
atcagcataaaccgacgactctaccttggaaaaccaatgtcctacaatgacaaacttggc
gtggtcaactactgtagtataaaaagtggatttatcatttctcgtcttctcctccttgac
ctcgcgatgcagcttgatgcttgttctgaggatggatctcaagcatctttatctcccgac
aaatggctcggacgatgtatcaaacgagccacaagtggcgctgtggagtgcgtagacgaa
gaagaggctatcttctaccatacatttaacatggagaacagcaaccttaactttgaggtg
gaaaccacacccgagtttgaagaagctgttaccgtttcaggggtgaattcgccacaaatg
atgttccaactgcacaagaaatattcacagcttgagattgacaaagcttataaagaaatt
ggggaaatacaggatgaaattaaatctttggtgcccaaactgccagaaggtgagcgggaa
ttatcttggccaatcggaattaatccttcatttaaaccgaccaatcggtgggatattatt
gtttgggattatttcacggaggattacactttaacttgccctggggaagtaccaaagtgt
gatttaaccggtgtagacaaactagacattcagaatattctacagattgcattggatcga
ctgaatgagaaatataatccacaagggttaatcctcgagaagaggaagttaatcaacggg
taccgaagatttgatcctcagagaggaatggagtacattcttgatcttcttctaaccgtc
atcatggagaacgaaaatcaagaaattgagctgagtcatcgtgttaatatgctccgtccg
ctgagtcaggttgaaattattccaatgccttatgtgactgaatcagccaaagttcatata
attctccctctcaccaagcaagaacgagtttattttgaagctttcatggataaatatgcc
aaggtttgtttaaacaatgatgaaaatgtcgctttaaacattgtgttcgtgtacgaccct
gaaactgcgcaacgtattcatcaagatgatatatttgctgagcagaaacaacttttgcaa
agttacgaggcgcgttataagaaagatgggaaagaaggaaaattgattccctgggttagc
attaaaactgaagttccttcacagttaaaaacaatggatatcgttgctaagaaatatcca
acagaaagtttgttccttttaacaagtgtggcagctaacatgaatacaaactttctgaac
cgatgtagaatgaatgccattccaggttggcaagtatttttcccgatccccttctcacag
tacaacccacagattattttccagaatggtcaagtacctgaacagattgacattaagcct
tccaacggacattttgatttgtattcatttgatgaagtttgtttctacaactctgactac
atggcttcgagaacaaaaatggccgccactgtcagtgccgaagacagcaaagagtcttta
agtgacctggttgacacgttagaggtgtacgacatcatgattaagtattcacaactccat
gtgtttcgtgcggtagaaccacaactcacacgaagatatgtgcacaggaattgcaacaag
agaaatggccaggaaatctttgaccgttgtgaacgtagtaacgctgaaggcctcgcatct
agaacacaattagccatggagctcttcccagaaaacaaagaacctagcaaaacttga
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