Ciona intestinalis (yellow sea squirt): 100187481
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Entry
100187481 CDS
T01056
Name
(RefSeq) DDB1- and CUL4-associated factor 10-like
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100187481
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100187481
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Gene cluster
GFIT
Motif
Pfam:
WD40
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
100187481
NCBI-ProteinID:
XP_009857818
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All DBs
Position
2:3392176..3395841
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AA seq
392 aa
AA seq
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MLDPRTMSVVNKREHVHTKHCNTISFIDNLLFTTCSDDGNVAIWDIRSMREEVLKLCGHT
SWVKNVEYHKPSKCLVSAGFDDNIITWDINNLLPNGECKSEVVLTCPRLMRMRLSPDGNS
MYISTIQAVDLIAIHNLEIEKLTTDINKIVLNDEFGDYFVQFNNTQVPVNREEPFEAQSQ
PMTRRNHLELYYGHSSDLTKHDPINVFCQSIDVHPQNMAVVLRYDRFATSVEKLTSVHNT
WSHYHGEHQGNNKWQADAQGNSSIPLPRGQTTNVMMEESLDNIEYIQEVSFSPCGRFIAS
PFGYGIRLVSYDSNLYDYQTHMASRVHGMHKSAKGSDTVMPAHTFIDAAPLHDVTYCFGH
RSLVLSTAFSPVGIQIVTGSKNGEIVFYEPVL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatcctcgtacaatgagtgtggtgaataaacgtgaacatgttcatacaaaacac
tgcaacacaatttcatttattgataaccttctcttcacaacttgctccgatgatggaaac
gtcgcaatctgggatattaggagcatgagagaggaagttttaaagctttgcggtcacact
agttgggtgaagaacgttgaatatcataaacctagcaaatgtcttgtatctgcaggattt
gatgataatatcattacatgggatataaacaatttgcttccgaatggagaatgcaaatct
gaagttgtattaacttgtcctcgattaatgagaatgagattatcacctgatggtaacagt
atgtacatttctactattcaagctgtagatctgattgcaatccacaatcttgagattgaa
aagcttaccacagacataaacaagattgtattaaatgatgagtttggagattatttcgtt
caatttaataacacacaagtccctgtcaatcgtgaagaaccatttgaagcacaatcacaa
ccaatgacaagaaggaaccacttagaattgtactatggtcacagttctgaccttacaaag
catgaccctattaatgtcttctgccaatctattgatgtgcacccacaaaacatggctgtt
gtattgagatatgacaggtttgcaacctcagtggaaaagttaacttcagtgcacaacaca
tggtctcactaccatggtgagcatcaagggaataataaatggcaggcagatgcacaaggt
aattcgtctatcccgttacctcgtggccagaccactaacgtaatgatggaagagagcctt
gacaatatcgaatacattcaagaagtttcattctcaccatgcggtcgatttatcgcatct
ccatttggatatggcattagactcgtctcatacgattcgaacctgtatgattaccagaca
cacatggcgtctcgtgtgcacggaatgcacaagagtgccaaaggttcggacacggttatg
ccagcacacacattcattgatgctgcccctttgcacgacgtgacttattgtttcggacac
cgtagtttggtgctgtccactgctttttcaccagttggaatacaaatcgtcactggctca
aaaaatggcgagattgtattttatgaaccagttttatga
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