Ciona intestinalis (yellow sea squirt): 100187510 Help Entry 100187510         CDS       T01056                                  Name (RefSeq) WD repeat-containing protein 48   KO K15361   WD repeat-containing protein 48 Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09124 Replication and repair    03460 Fanconi anemia pathway     100187510  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cin03400]     100187510 DNA repair and recombination proteins [BR:cin03400]  Eukaryotic type   DSBR (double strand breaks repair)    FA (Fanconi anemia) pathway     Other FA pathway factors      100187510 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 Beta-prop_WDR3_1st DUF3337 Beta-prop_THOC3 WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_EIPR1 NBCH_WD40 Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_SCAP WD_LRWD1 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Nucleoporin_N Beta-prop_Vps41 ANAPC4_WD40 WDR54 Beta-prop_IP5PC_F Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  100187510 NCBI-ProteinID:  XP_002127032 LinkDB All DBs Position 1:complement(2212398..2215657) Genome browser AA seq 698 aa AA seqDB search MQQRRETSLSRKKIQVSFVIRDAVEKYNRSGVNALQVDPSINRLYTAGRDSIIRIWNINE PERKETDHYVGSMEHHTDWVNDIVLCCNGRTLISASSDTTVKVWNAHRGFCMSTLRTHKD YVQSLAYAKHKEHVASAGLDRQIFIWDVNTLTALTTTRNTVTTSNVNGCKNSIYSVAMND AGTVLVAGSTERALRVWDPRTCEKRMKLRGHTDNVKAIWINREGTQVLSGSSDGSVKLWS LGQQRCIATLRVHNEGIWTLAATQSGSTFGNIFSSGRDGQVICTDMQDPNFAHYLVCQET ASVAQLQLDGKETPELIYCATTNTHVNAWKIKQSDIENDAEMAETFSDSFFQFKQPYSTQ PSYVVPGGSGITQYKVMPDKRHILTQNTEDRVALWDVLTASCVKDIGLADFESEVKKREQ MVYVPNWFAVDLKLGMLSIHLEEPECFYGWMAAKDVAGFNVVDPVAKVNYGSVMLHVLLE QWPVTQEKLIEPPNETGEPNPAAQVKPKGNQYFKVPPHIPVIFSEVGGRTLFRLLCGDAA GETEGMLLRETVPHWVLQAVTENKISVPYIKISFYLQPHPSSKIKPLKNVNNKLSANDLL SMAKVMEHVHEKILCSDDASQASANGGSSSTADPTENAEKTASDCSEDQAKAAVAVSEHN LELLCSDMILNPDWNLRTVKFLIWKGKGDLILHYRLKN NT seq 2097 nt NT seq  +upstreamnt  +downstreamnt atgcagcagagaagagaaacatctctttcaaggaagaagattcaagtctcgtttgtaatt cgtgatgctgtggaaaaatacaatcgttctggcgtaaatgcactgcaggtcgacccgtct ataaaccgtttgtacacggcaggtcgagactctattattcgaatatggaatattaatgaa cctgaaagaaaagagacggaccattatgtgggctcaatggagcatcatactgactgggta aacgacattgttctgtgttgcaatggcaggacattaatttctgcgtcatctgatacaact gtaaaagtgtggaatgcccatcgagggttttgtatgtctaccttacgcacgcataaagat tatgtacagtctttggcttatgctaagcataaggagcatgtggctagtgccggccttgat aggcagatatttatttgggatgtgaataccttgactgctttgaccactacaagaaataca gtgaccacatcaaatgtgaatggttgtaaaaattcaatatacagtgttgcaatgaatgat gctggaacagttcttgtggctgggtccactgaacgtgctctgagggtctgggatcctcgg acatgcgaaaagcgaatgaagcttcgtggccacacagataatgtaaaggcaatatggatt aacagggagggaacacaggtcctttccggtagttctgacggctcagtaaagctgtggtcc cttggtcagcaaaggtgcattgccactttgcgcgtacataatgagggtatatggacttta gctgcgactcaaagtggaagcactttcggaaatattttctcatctggtcgagatggtcaa gtgatatgcacagacatgcaagatcccaactttgcacattaccttgtgtgtcaggagact gcttctgttgcgcagctacaattagatggtaaagaaactccagagcttatttactgtgcc acaactaatactcatgtcaatgcttggaaaataaaacaaagtgatatagaaaatgacgca gaaatggctgagacattcagtgatagttttttccagtttaagcaaccttattccacccaa ccttcctatgttgtgcccggtggatcaggcatcactcaatacaaagtcatgcccgacaag agacacattttgacgcaaaacacagaagatcgagttgccctttgggatgttctcactgca tcctgtgtgaaggatataggtctagcagattttgagagcgaagtcaaaaagagggaacaa atggtgtacgtcccaaattggtttgcagttgatcttaaactagggatgcttagtattcac ttggaagagccagaatgcttttatggatggatggcggcaaaagatgtggcaggttttaac gttgtggatccagtagctaaggtaaactatggcagtgtgatgttgcatgtgttgctggag cagtggcctgtaacgcaggagaaattaattgaaccaccaaatgaaacaggagagccaaac cctgcagcgcaggtgaaaccaaaagggaatcaatattttaaagttccaccacacatccct gtgatatttagtgaggtaggggggaggacgttgtttcggttgctatgtggagatgcagct ggagaaacagaaggaatgctcctacgtgagactgtaccacactgggtcctgcaagcagta acggagaacaaaatctcggtgccctacataaagatttcgttttacctccaaccccaccca tcttcgaagatcaaaccattaaaaaacgtgaacaataaactttctgccaacgaccttttg tcgatggccaaagtaatggaacatgtgcatgagaagatattatgttcggatgatgcttca caagcttccgctaacggtggaagcagctctactgctgatccaactgaaaacgcagagaaa acggcgtctgattgttctgaagatcaagcaaaagctgctgttgctgtttcagagcataac ctggaactcttgtgtagtgatatgattctaaatccagattggaatctcaggactgtaaaa tttcttatatggaaaggcaaaggggatctaatactgcactaccggctaaaaaattaa

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