Ciona intestinalis (yellow sea squirt): 100187539
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Entry
100187539 CDS
T01056
Name
(RefSeq) protein IWS1 homolog
KO
K17498
transcription factor SPN1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100187539
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100187539
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med26
Motif
Other DBs
NCBI-GeneID:
100187539
NCBI-ProteinID:
XP_009858604
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All DBs
Position
5:928749..934671
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AA seq
767 aa
AA seq
DB search
MDPVDDNNEPHSPQSGYLEEGEGDGSFLEEGQNDEQYVEHNLNSSENVETDNGFAQIEET
VEDGGEEDEDQEQGLGIEQNAEYGQLEQVVGEEENGDDEQEEGNISGELMEGEQNVSYDS
VEVGEVEKEVGDEGEEVAFHAGEEDILEEEVEGEEHLEENVQEFVHEEGDPSEQQEEVIN
EEHDVIGEEVLEEEGEEVETYEDGGVHDSSAEVREEGFENVSFNEEATNDAGNEVTEDAA
FEEQAEEKLKEMNDAEFDQVPTSTNDMYVDQVDAEDVAEDVVAEVGADENEYEAAVEVEE
GMQEDEVDENVAEHVSDSDEDQEDTASDGVKLSHVSDDDERGSDFEESNSQVKATQDESV
NQAQIAKMFDSDSDDDAAENEGDLINDIFGKSDDEDEEFTGFGVEEVKKKDERSKSAVGA
ISSDSDDDSEPTPAGEASKQQTPEGTEGDYDSDEGVKDVRKEGGIVYDFDLMLERKKNER
KGRRKKDGGTFISDADDIINAMLTKMREAAEADREANKHRKPALNKLKMLPTVIRHLKKQ
DLKESFVDMGMIAAVDDWLSLLPDRSLPHLSIRTELLKILHELPGVSSETLKTSGIGKSV
MRLFKHPRETRKNRESAGRLINKWSRPIFGLNDNFKSMSRGDREQRDLEHMPQAKRRRLS
AGQNERREGEEEGAGEAEQLRPGERGFVMRARVPAPSHKDYVIRPKWKVDLMEDEDSQRF
HRRSKGKQGKKDDRLEKHLKSFADRRKHSKMQRAVGISIEGSKMPLT
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggatccagttgatgataataatgaacctcattctccacaatctggatatttggaagag
ggggaaggtgatggaagctttttagaggaaggacagaatgatgagcagtatgtggaacac
aatttaaatagctcggaaaatgtcgaaacagacaatgggtttgctcaaattgaagaaact
gtggaggatggaggcgaggaagatgaggatcaggaacaaggtttgggaattgaacagaat
gcagagtatggtcaactggagcaggttgttggtgaagaagaaaatggtgatgatgaacaa
gaagaaggaaacatcagcggtgaactgatggaaggagagcaaaatgtttcctatgattcg
gttgaagttggtgaagtggagaaagaggtgggggatgaaggcgaagaagttgcttttcac
gctggtgaggaagatattttggaagaagaagttgagggagaggagcacttggaggaaaat
gttcaagagtttgttcatgaggagggtgatcctagtgagcaacaggaggaagtgataaat
gaagagcatgatgtgattggtgaggaggttcttgaggaagaaggtgaagaagtagaaact
tatgaggatggtggagtccatgatagctctgcagaggttagagaggaaggtttcgaaaat
gtgtctttcaatgaagaggcaactaatgatgctgggaacgaagttacggaagatgcagct
ttcgaagaacaagctgaagaaaaactgaaagaaatgaatgatgcagaatttgatcaggtt
cctacatcaacaaatgacatgtacgtggatcaagttgatgcagaagatgttgctgaggat
gttgttgctgaggttggagcagatgagaatgagtatgaagctgcagtggaggtggaggag
gggatgcaagaggatgaagttgatgaaaatgttgcagagcatgtaagtgatagtgatgaa
gatcaagaggacacggcaagtgatggagtgaaacttagccatgtgtcagatgatgacgaa
agaggttccgattttgaagaaagcaactcccaagttaaagcaactcaagatgaatcagtt
aatcaagcacagattgcgaaaatgttcgactcggatagcgatgatgatgctgctgaaaat
gagggagatctgatcaatgatattttcgggaagagtgatgatgaagatgaggagttcact
ggcttcggagtggaggaagtgaagaagaaagatgagagaagcaagagcgctgtcggagca
atcagctcagattctgatgatgacagtgaaccaactccagctggagaagcaagtaagcag
cagacacctgaaggtacagaaggtgattatgattcggatgaaggtgtcaaagatgttcgg
aaagaaggagggatcgtatatgactttgaccttatgttggaacgaaagaaaaatgaaagg
aaaggacgtcgtaagaaggatggtgggacctttatatctgatgccgatgatatcattaat
gcaatgcttacaaagatgagagaagctgcagaagcagatagagaagccaataaacatagg
aaacctgctctaaataaactcaagatgttgcctactgtgatacgacacttgaaaaaacag
gatttgaaggaatcttttgttgacatgggaatgatagcggctgttgatgactggctctca
ttgctacccgaccgcagcttacctcaccttagcattcgaaccgaacttctgaaaattctt
catgagttgccaggtgtaagttcggaaaccttaaaaacaagtggtattggaaagtcagtg
atgcgactctttaaacatccacgagagacaagaaaaaatcgcgaatctgcaggaagatta
attaacaagtggtcacgtcctatctttggtttaaatgacaactttaagagtatgtccaga
ggagatcgtgaacaaagagatttagagcatatgccgcaagcaaagcgccggcgattgagt
gctggtcaaaatgagagaagggaaggtgaagaagaaggtgctggagaagctgagcaactt
cgtcctggtgaacgagggtttgtgatgcgggcaagagtgcctgctccttcacacaaggac
tatgtcattcgacctaaatggaaagtagatttaatggaagatgaagacagtcaacggttt
caccgacgatccaagggcaagcagggtaaaaaagatgacagactcgagaagcatttgaaa
tcttttgcagaccgtcgcaagcacagtaagatgcaaagagcggttggaataagtattgaa
ggaagcaaaatgcctcttacgtga
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